Gene RSP_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1008 
SymbolubiA 
ID3720724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp2766198 
End bp2767199 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content71% 
IMG OID640072236 
Product4-hydroxybenzoate polyprenyltransferase 
Protein accessionYP_354092 
Protein GI77464588 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGC CGCGCCAAGC GCCAGAGGCT CCCGCCGGGG GACCGGCGGC CGGGACGACG 
CAGGGTACGG TGGCCGATGC CCCGCCCGGT AACTGGGTCG ACCGGCTCGC GCCCGCCGCC
ACGCGGCCCT ATCTGCGCCT GTCGCGCGCC GACCGGCCGA TCGGGACATG GCTTCTGCTG
ATCCCCTGCT TCTGGGCGGT GGCGCTGGCG GCGCTGGCCG ATCCCGGGGG ATACCGGCCG
CTCGACCTCT GGCTCGTGAT CGGCAGCTCG GTCGGCGCCT TCCTCATGCG CGGGGCGGGC
TGCACCTGGA ACGACATCAC CGACCGCGAG TTCGATGCCG CGGTGGCGCG CACCCGCTCG
CGCCCGATCC CCTCGGGGCA GGTCAGCGCG AAGGCCGCGG CGGTCTGGAT GGTGGTGCAG
GCGCTGGTCG CCTCGCTCAT CCTCTTCAGC TTCAACGGCA CCGCGATCCT GCTGGGCGTG
GCGTCGCTCG CCCTCGTCTG CATCTATCCC TTCGCCAAGC GCTTCACCTG GTGGCCGCAG
GCCTTCCTCG GGCTCGCCTT CAACTGGGGG GCGCTGCTGC TCTGGGCCGC CCACACCGGC
AGCCTCGGCT GGGCACCTGT GGCGCTCTAT GCCTCGGGGA TCGCCTGGAC CCTGTTCTAC
GACACGATCT ACGCCCATCA GGACAAGGAG GACGATGCGC TGATCGGGGT GCGCTCGACC
GCGCGGCTCT TCGGGCAGCA TACGGGCAAG TGGCTCGTGG CCTTCATGAT GGCGGCGACC
CTCCTGATGA CGCTCGCGGT GCTGCTGACC GTGCTGCCGC AGGGCTCGAT CCTCCAGCTC
TTGATCGCGC TCGCGGGCGT CTGGGGCTTC GGCGCCCACA TGACCTGGCA GATCGCCCGG
CTCGACACCG AGGACACCGC GCGCTGCCTG CGCCTCTTCC GCTCGAACCG GGACGCGGGC
CTGATCCCTG CGCTGTTTCT CGCCACAGCC GCGCTCCTTT GA
 
Protein sequence
MQQPRQAPEA PAGGPAAGTT QGTVADAPPG NWVDRLAPAA TRPYLRLSRA DRPIGTWLLL 
IPCFWAVALA ALADPGGYRP LDLWLVIGSS VGAFLMRGAG CTWNDITDRE FDAAVARTRS
RPIPSGQVSA KAAAVWMVVQ ALVASLILFS FNGTAILLGV ASLALVCIYP FAKRFTWWPQ
AFLGLAFNWG ALLLWAAHTG SLGWAPVALY ASGIAWTLFY DTIYAHQDKE DDALIGVRST
ARLFGQHTGK WLVAFMMAAT LLMTLAVLLT VLPQGSILQL LIALAGVWGF GAHMTWQIAR
LDTEDTARCL RLFRSNRDAG LIPALFLATA ALL