Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0934 |
Symbol | gpmI |
ID | 3717921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 2683669 |
End bp | 2685189 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640072159 |
Product | phosphoglyceromutase |
Protein accession | YP_354017 |
Protein GI | 77464513 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0696] Phosphoglyceromutase |
TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.353099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCAC CGAAACCCGT CGTCCTCTGC ATCCTCGACG GCTGGGGGCT TCGTGCCGAG CGCGAGGCGA ATGCCGTGGC GCTGGCCGAA ACCCCGACCT TCGACCGGCT GATGGCGACC TGCCCGAACG CGACCCTCGT CACCCACGGC CCGGATGTGG GACTGCCGCG GGGCCAGATG GGCAATTCCG AGGTCGGGCA CACCAACATC GGCGCGGGCC GCGTGGTGGC GATGGACCTT GGCGCCATCG ACCTTGCCAT CGAGGAGGGG TCGTTTCCGC AAAACCCGGC GCTGCGCGAC TTCATCGGGA AGGTGAAGGC CAAAAGCGGC ACGGCGCATC TGATGGGCGT CGTCTCGGAC GGCGGCGTGC ACGGGCATAT CCAGCATCTC ATCAGCGCGG TCGAGGTTCT GGCGGGCGAG GGCATTCCGG TCGTAATCCA TGCGATCACC GACGGGCGCG ACGTGGCCCC CACCTCGGCG GGCGAGTTCG TGGGCCAGCT CGTGCGGGTG CTGCCCGAGG GCGCCCGTAT CGGCACGGTC ATCGGCCGCT ACTGGGCGAT GGACCGCGAC AAGCGGTGGG ACCGGGTGAA GCGCGCCTCC GACGCGATGC TCCATGCCAC GGGCGAGCAC GCGCCCGACG CCGAGGCCGC GGTGGCGGCC GCACTGGCGC GGGGCGAGAC CGACGAATTC ATCGCGCCGA CCGTGGTCGG CGACTATGCA GGCGCCCGCG ACGGCGACGG CTTCTTCTGC CTCAACTTCC GCGCCGACCG GGCGCGCGAG ATCCTCGCCG GTCTCGCCCA GCCGGGCTTC GACGCCTATG ACACGGGCGC GCGGCCGGAC TGGTCGGCCT TCCTCGGGAT GGTCGACTAT TCCAAGGAGC ATGACCGCTT CATGACCACG GCCTATCCCA AGCCCGTGAT CCGCAACACG CTGGGCGAAT GGGTGGCGAG CCATGGGCTG CGGCAGTTCC GCATCGCGGA AACCGAGAAA TATCCCCATG TCACCTTCTT CCTGAACGGC GGCCGCGAGG CGCCGGAGAC GGGCGAGGAT CGCTACATGG CCAATTCGCC CAAGGTCGCG ACCTACGACC TCCAACCGGA GATGTCCGCC CCCGACGTGA GCGACCATCT CGTCGAGGCC ATCGGCGCGG GCTATGACCT GATCGTGGTG AACTACGCCA ACCCCGACAT GGTGGGCCAC ACGGGCGATC TGAAGGCCGC CATGGCCGCC GTCGAAGAGG TGGACCGCGG GCTCGGCCGG GCGGTCGAGG CGGTGACGAA GGCGGGCGGG GCCATGATCG TGACGGCCGA TCACGGCAAC TGCGAGACGA TGGTCGATCC CGAAACCGGC GGCCCGCACA CGGCGCACAC CACGAACCCG GTGCCGGTGA TCCTCGTGAA CGGGCCTGCG GGTGCGCGCC TCCATGCGGG CCGTCTCGCC GATCTCGCGC CGACGCTGCT GCAACTCATG CAGCTGCCTC AGCCCGAGGA GATGACCGGG CGGAGCCTGA TCGACGCATG A
|
Protein sequence | MTAPKPVVLC ILDGWGLRAE REANAVALAE TPTFDRLMAT CPNATLVTHG PDVGLPRGQM GNSEVGHTNI GAGRVVAMDL GAIDLAIEEG SFPQNPALRD FIGKVKAKSG TAHLMGVVSD GGVHGHIQHL ISAVEVLAGE GIPVVIHAIT DGRDVAPTSA GEFVGQLVRV LPEGARIGTV IGRYWAMDRD KRWDRVKRAS DAMLHATGEH APDAEAAVAA ALARGETDEF IAPTVVGDYA GARDGDGFFC LNFRADRARE ILAGLAQPGF DAYDTGARPD WSAFLGMVDY SKEHDRFMTT AYPKPVIRNT LGEWVASHGL RQFRIAETEK YPHVTFFLNG GREAPETGED RYMANSPKVA TYDLQPEMSA PDVSDHLVEA IGAGYDLIVV NYANPDMVGH TGDLKAAMAA VEEVDRGLGR AVEAVTKAGG AMIVTADHGN CETMVDPETG GPHTAHTTNP VPVILVNGPA GARLHAGRLA DLAPTLLQLM QLPQPEEMTG RSLIDA
|
| |