Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0912 |
Symbol | dctM |
ID | 3717975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 2661465 |
End bp | 2662790 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640072137 |
Product | TRAP dicarboxylate family transporter DctM subunit |
Protein accession | YP_353995 |
Protein GI | 77464491 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.836274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAG CCCTCATCTT CGGCGGTCTC ATCGCCCTCA TGCTGACCGG CATGCCGATC TCGATCGCGC TCGGCCTGAC GGTTCTGACC TTCCTCTTCA CCATGACGGC CGTGCCGATC GACACGGTGG CGCTGAAGCT CTTCACCGGC ATCGAGAAGT TCGAGATCAT GGCGATCCCG TTCTTCATCC TCGCGGGGAA CTTCCTGACC CACGGCGGGG TGGCGCGGCG GATGATCGCC TTCGCCACCT CGATGGTGGG CCACTGGCAC GGGGGCCTCG GCCTCGGCGG CGTCTTCGCC TGCGCCCTCT TCGCCGCCGT CTCGGGCTCT TCGCCCGCGA CCGTGGTGGC CATCGGCTCG GTCATCCTGC CCGCCATGGT GGCGCAGGGC TTCCCCACCC GCTTCGGCGC GGGCGTCATC ACCACGAGCG GCGCGCTCGG CATCCTGATC CCGCCGTCCA TCGTGATGGT GATGTATTGC GTGGCCACCT CGGGGATGAT GGTCGAGGGG CCGGACGGCA CCATCGTCGA TGCGGCCTCG GTGGGCGAGA TGTTCATCGC GGGCGTGATC CCGGGGATCA TGCTGGCGGG CGCGCTCGCC CTCACCACCT GGTATCGGGC CTGGAAGAAC GACTATCCCC GCCTGCCGAA GGCCAGCTGG GGCGAACGCT GGCAGGCCTT CCGCCGGGCG ATCTGGGGCC TCCTGCTCAT CGTGATCGTG ATGGGCGGCA TCTATACCGG CACCTTCACC CCCACCGAAG CCGCCGCCAT GAGCGCCGTC TATGCCTTCG TGATCGCGGT CTTCGTCTAC AAGGACATGG GGCTCAGGGA CGTGCCGCGG GTGCTGCTCG CCTCGGCCAA CATGTCGGCG ATGCTGCTCT ACATCATCAC CAATGCGGTG CTGTTCAGCT TCCTGCTCAC GCACGAGAAC ATCCCGCAGG CGCTCGGCCA GTGGATGGTG GATTCGGGCC TGACCTGGTG GATGTTCCTC ATCGCGGTGA ACATCATCCT GCTCGCGGCC GGCAACTTCA TGGAGCCCTC CTCCATCGTG CTCATCATGG CGCCGATCCT GTTCCCGGTG GCCGTGCGGC TCGGGATCGA CCCGGTGCAT TTCGGGATCA TGATCATCGT GAACATGGAG GTCGGCATGT GCCACCCGCC CGTGGGGCTG AACCTCTATG TGGCCTCGGG CATCACCAAG ATGGGCATCA CCGAGCTCAC CATCGCGGTC TGGCCGTGGC TGCTGACGAT GCTGGCCTTC CTCCTGCTCG TGACCTACGT CCCGCAGATC TCGCTCTTCC TGCCGCATCT GCTGGGCATG CGCTGA
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Protein sequence | MNAALIFGGL IALMLTGMPI SIALGLTVLT FLFTMTAVPI DTVALKLFTG IEKFEIMAIP FFILAGNFLT HGGVARRMIA FATSMVGHWH GGLGLGGVFA CALFAAVSGS SPATVVAIGS VILPAMVAQG FPTRFGAGVI TTSGALGILI PPSIVMVMYC VATSGMMVEG PDGTIVDAAS VGEMFIAGVI PGIMLAGALA LTTWYRAWKN DYPRLPKASW GERWQAFRRA IWGLLLIVIV MGGIYTGTFT PTEAAAMSAV YAFVIAVFVY KDMGLRDVPR VLLASANMSA MLLYIITNAV LFSFLLTHEN IPQALGQWMV DSGLTWWMFL IAVNIILLAA GNFMEPSSIV LIMAPILFPV AVRLGIDPVH FGIMIIVNME VGMCHPPVGL NLYVASGITK MGITELTIAV WPWLLTMLAF LLLVTYVPQI SLFLPHLLGM R
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