| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0872 |
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| Symbol | def1 |
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| ID | 3718226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2620676 |
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| End bp | 2621209 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640072098 |
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| Product | peptide deformylase |
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| Protein accession | YP_353956 |
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| Protein GI | 77464452 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACGCC CCATCCTGAT CCACCCGGAC CCGCGCCTGA AGAAGATCTG CGACCCTGTC
GGCCAGATCA CCGACGACCT GCGCCGTCTG GCCGATGACA TGCTGGCCAC GATGTATGAC
GCGCCGGGGA TCGGCCTCGC CGCGCCGCAG GTGGGGGTGG TGCGGCGGCT GATCGTGCTC
GACTGCAACA AGGAGAGCGA CGGTGCCCGG CGCCCGGTCG CCATGGTCAA TCCCGAGGTC
GTGTGGCGCT CGGAGGATGT CTCGACCTAC GAGGAAGGCT GCCTCTCGCT GCCCAACGTC
TTCGCCGACG TGGAGCGCCC GGCCGAGGTG AAGGTCCGCT GGACCGGCCT CGACGGCCGC
GAGGAGGAGG AGCAGTTCGC CGGCCTCTGG GCCACCTGCG TGCAGCACGA GATCGACCAT
CTCGACGGCA AGCTCTTCAT CGACTACCTG CGCCCGCTCA AGCGGCAGAT GATCACGCGC
AAGATGGAGA AGTTCAAGCG CGCCCAGGCT TCGGGCATGG TGCAGAAGGC CTGA
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| Protein sequence | MIRPILIHPD PRLKKICDPV GQITDDLRRL ADDMLATMYD APGIGLAAPQ VGVVRRLIVL
DCNKESDGAR RPVAMVNPEV VWRSEDVSTY EEGCLSLPNV FADVERPAEV KVRWTGLDGR
EEEEQFAGLW ATCVQHEIDH LDGKLFIDYL RPLKRQMITR KMEKFKRAQA SGMVQKA
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