| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0831 |
|---|
| Symbol | trpA |
|---|
| ID | 3718371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2576608 |
|---|
| End bp | 2577399 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640072052 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_353911 |
|---|
| Protein GI | 77464407 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGGA TCGACGACAC CTTCCGGCGG CTTCGGGCCG AGGGGAAGAA GGCCTTCGTG
GCCTATATCA TGGCGGGCGA TCCCGATCTC GAGACGTCGC TTGCGGTGAT GCGGGGCCTG
CCGGAGGCGG GCGTGGACAT CATCGAGCTG GGCATGCCCT TCACCGATCC GATGGCCGAC
GGCCCGACGA TCCAGACGGC CGGCCAGCGC GCCCTCGAGG GCGGCCAGAC GCTGACCCGG
ACGCTCGAGA TGGTGCGCGC CTTCCGGGCG GAGAATGCCG AGACGCCCAT CGTGATGATG
GGTTACTACA ATCCGATCTA TGCGCGCGGC GTCGAGACCT TCCTCGCCGA GGCGACGGAG
GCCGGGATCG ATGGGCTGAT CGTGGTGGAC CTGCCGCCCG AGGAGGATGC CGAGCTCTGC
CTGCCCGCAC AGGCGGCGGG GCTGAACTTC ATCCGGCTCG CGACCCCCAC CACCGACAGC
CGCCGCCTGC CCAAGGTGCT GCAGAACACC TCGGGCTTCG TCTATTACGT CTCGATCACC
GGCATCACCG GCGCGGCGGC CGCGCAGGCG GCCGATGTGG CGCCCGAAGT GGCGCGCATC
AAGGCCGCGA CGGATCTGCC GGTCATCGTG GGCTTCGGCA TCACCACCCC CGAGGCCGCG
CAGGACCTCG CGGGTATCGC CGACGGCTGC GTGGTGGGCT CGGCGATCGT GAAGCTCGTG
GGCGAGGGCC GGCCGGTGGC CGAGGTGCTG GACCGGGTGG CGGCGCTCGC GGCCGGCGCT
CACGCGGCCT GA
|
|---|
| Protein sequence | MTRIDDTFRR LRAEGKKAFV AYIMAGDPDL ETSLAVMRGL PEAGVDIIEL GMPFTDPMAD
GPTIQTAGQR ALEGGQTLTR TLEMVRAFRA ENAETPIVMM GYYNPIYARG VETFLAEATE
AGIDGLIVVD LPPEEDAELC LPAQAAGLNF IRLATPTTDS RRLPKVLQNT SGFVYYVSIT
GITGAAAAQA ADVAPEVARI KAATDLPVIV GFGITTPEAA QDLAGIADGC VVGSAIVKLV
GEGRPVAEVL DRVAALAAGA HAA
|
|---|
| |