Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0576 |
Symbol | |
ID | 3718028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 2316462 |
End bp | 2318279 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640071787 |
Product | Na+/solute symporter |
Protein accession | YP_353651 |
Protein GI | 77464147 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCAAT TCACTCTCAA CCTGATCGTG GTCGGCATCA CCTTTGCCAT CTACATCGGG ATTGCGATCT GGGCCCGGGC GGGTTCGACC GCAGAGTTCT ATGCCGCCGG TCAGGGCGTG CACCCGGTCA TGAACGGCAT GGCCACGGGC GCGGACTGGA TGTCGGCGGC CTCCTTCATC TCGATGGCGG GCATCATCGC GCTCGCCCCG GCCGGCGGCT ACACCCAGTC GGCCTTCCTC ATGGGCTGGA CCGGCGGCTA TGTGCTTCTG GCCCTGCTGC TCGCGCCCTA CCTGCGCAAG TTCGGCAAGT TCACCGTGCC GGAATTCATC GGGGACCGCT TCTATTCGGG CGGCGCCCGG CTTCTGGCGG TGGTCTGCCT CATCATCATC TCGATCACCT ATGTGATCGG GCAGATGCGC GGCGTGGGCG TGACCTTCGG GCGCTTCCTC GAGATCTCGA CCGACATGGG TCTCTACATC GGCGCGGCGA TCGTCTTCGC CTATGCCGTG TTCGGCGGCA TGAAGGGCAT CACCTACACG CAGGTGGCCC AGTATGTCGT GCTCATCATC GCCTACACGA TCCCCGCGAT CTTCATCTCG CTCGCGCTGA CGGGGGCCTT CCTGCCGCAG CTCGGCCTGA TCGGCGACTA TGCGCCCGCG GGCGGCGACC AGGCGTTCCT CGCCAAGCTC GACCAGGTGG TCACGGAACT GGGCTTCACC GCCTACACCG CCGATACGCC CTCGATGCTG AACATGTTCC TCTTCACCAT GTCGCTGATG ATCGGCACCG CGGGCCTGCC GCACGTCATC ATCCGCTTCT TCACCGTGCC GAAGGTGGCC GACGCCCGTT CCTCGGCCGG CTGGGCGCTC GTCTTCATCG CGCTCCTCTA TACCGTCGCT CCGGCCGTGG GCTCGATGGC GCGCCTGAAC CTGACCACCA CCATGTGGCC CGGCGCCGTG ACGGGCAATG CGCTGGATGC CGATGCGATC TCGGTCGAGG CGATCCAGAC CGATCCGCGC CTGAACTGGG TGAAGACCTG GGAACAGACC GGCCTGCTCG TGATGGAAGA CCTGAACGGC GACGGCAAGA TCCAGTACTA CAACGACAAG AACCCGGCGA TGGCCGAGGT GGCCGCCGAG CGCGGCTGGG CCGGCAACGA AGTCACCAAG ATCGACAACG ACATCATGGT GCTCGCCAAC CCCGAGATCG CGGCCCTTCC GGGCTGGGTG ATCGCGCTCG TGGCCGCCGG CGCGCTGGCT GCCGCCCTCT CGACCGCGGC GGGCCTGCTG CTCGCCATCT CGTCTGCGAT CTCGCACGAC CTCATCAAGG GGTCGATCAA CCCGAACATC TCGGAGAAGG GCGAGCTTCT GGCCGCGCGG ATCTCGATGA CCGGCGCGAT CGCGATCGCC ACCTGGCTCG GCCTCAACCC GCCCGGCTTT GCCGCGCAGG TGGTGGCACT GGCCTTCGGT CTGGCCGCCG CGACGATCTT CCCGGCGCTG ATGATGGGGA TCTTCTCGAA GCGCGTGAAC AAGGAAGGCG CGATCCTCGG GATGCTCGTC GGCCTGATCT TCACCGCGGT CTACATCTTC CTCTACAAGG GCTGGTTCTT CATCCCCGGC ACCGCGATGT ATGAAGACGT TCCCGCCAAC TACTTCTTCG GCATCTCGCC GCTGTCGATC GGCACCATCG GCGCCATCCT GAACTTCGCC GTGGCCTTCG GGGTCTCGGC GGTGACGAAG GCTCCGCCGC GTCAGGTGGT CGATCTGGTC GAAAGCATCC GCATTCCGCG CGGTGCCGGC AAGGCCACGG CCCACTGA
|
Protein sequence | MDQFTLNLIV VGITFAIYIG IAIWARAGST AEFYAAGQGV HPVMNGMATG ADWMSAASFI SMAGIIALAP AGGYTQSAFL MGWTGGYVLL ALLLAPYLRK FGKFTVPEFI GDRFYSGGAR LLAVVCLIII SITYVIGQMR GVGVTFGRFL EISTDMGLYI GAAIVFAYAV FGGMKGITYT QVAQYVVLII AYTIPAIFIS LALTGAFLPQ LGLIGDYAPA GGDQAFLAKL DQVVTELGFT AYTADTPSML NMFLFTMSLM IGTAGLPHVI IRFFTVPKVA DARSSAGWAL VFIALLYTVA PAVGSMARLN LTTTMWPGAV TGNALDADAI SVEAIQTDPR LNWVKTWEQT GLLVMEDLNG DGKIQYYNDK NPAMAEVAAE RGWAGNEVTK IDNDIMVLAN PEIAALPGWV IALVAAGALA AALSTAAGLL LAISSAISHD LIKGSINPNI SEKGELLAAR ISMTGAIAIA TWLGLNPPGF AAQVVALAFG LAAATIFPAL MMGIFSKRVN KEGAILGMLV GLIFTAVYIF LYKGWFFIPG TAMYEDVPAN YFFGISPLSI GTIGAILNFA VAFGVSAVTK APPRQVVDLV ESIRIPRGAG KATAH
|
| |