Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0546 |
Symbol | nifB |
ID | 3718055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 2282039 |
End bp | 2283514 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640071755 |
Product | NifB family--FeMo cofactor biosynthesis protein |
Protein accession | YP_353619 |
Protein GI | 77464115 |
COG category | [R] General function prediction only [S] Function unknown |
COG ID | [COG0535] Predicted Fe-S oxidoreductases [COG1433] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.351769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAACA TCATCTCGCT GGGCGGACTA CAGGTCGCGT CGCGCGACGA GCTCGGGCAG GCGATGGCGG GCGGCTGCAC CGCTTCCTCC TGCGGGACGA AGGCGGGACC CGCCGACATG GACCCGGCGA CCTGGGCCAA GGTTAAGGAT CACCCCTGCT ATTCCGAAGA GGCGCACCAT TATTTCGCGC GGATGCATGT CTCGGTGGCG CCCGCCTGCA ACATCCAGTG CAACTACTGC AACCGCAAGT ATGACTGCGC CAACGAGAGC CGCCCCGGCG TCGTCTCCGA GCGGCTGACG CCCGAGCAGG CGGCGCGCAA GGTGCTGGCC GTGGCCGCCG AGGTGCCGCA GCTGTCGGTG CTGGGCATCG CGGGCCCGGG CGATGCGGCC TATGACTGGA AGAAGACGAA GGCCACCTTC GACAAGGTCC AGTCGCAGCT GCCCGACATC AAGCTCTGCC TCTCCTCCAA CGGGCTCGCC ATGCCCGATC ATGTCGAGGA GATCGTGGCG ATGAACATCG ACCATGTGAC GCTGACCATC AACACGCTCG ATCCCGAGGT GGGAGCGAAG ATCTATCCGT GGGTCTTCTT CCGCGGCAAG CGACACGAGG GGGTTGAGGG GGCGGCGATC CTCCTCGCGC GCCAGATGGA GGCGCTCGAC ATGCTGGTCG CCCGCGGGGT GCTGGTGAAG GTGAATTCGG TCCTGATCCC CGGCATCAAC GATGCGGGCA TGGTCGAGCT GAACCGGGAG GTGAAGGCCC GGGGCGCGTT CCTGCACAAC ATCATGCCGC TGATCTCGGA TCCGGCGCAT GGCACCCATT TCGGCCTCAC CGGCCAGCGT GGCCCGACGG CGGCCGAGCT TCGGGCGGTG CAGGACCAGT GCGGCGACGG GGCGAACCTG ATGAAGCACT GCCGCCAGTG CCGCGCCGAT GCGGTGGGGA TGCTGGGCGA GGACCGCGGG CAGGAGTTCA CGCTCGACAA GCTGCCCGAG ACGGTCGCGG AGGATGGCGA GGAGAAGCGC GCAGCCTATC GCGACTGGGT GGCGCGCGAG CGGGCCGACC GGCGCGCCGC GACCGAGGCC GCGCAGGCCG AGGCCGCCGC CCTCGCCGCG CCGCCGATGC GCGTGGCCGT CTGCACCAAG GGCGGCGGGC GCATCAACCA GCATTTCGGC CATGCCACCG AGTTCCAGAT CTACGAGGTG GATGCGGGCG GTGTGCGCTT CCTCACTCAC CGGCGGGCCG ACAATTACTG CGTGGGCGGC CACGGCGAGA GCGACCGGCT GACCGAGATC GTCCGCACGC TCGACGGTGT GCCGGTCGTG CTCTGCGCCC GCATCGGCGA GGGGCCGCGG TCCCGGATGG CCGAAGCTGG CATCGAGGTG ATCGACGCCT GCGCCATGGA TTACATCGAG ACCGCGCTCC TCGACCTCTA TGCCGACCGC AACCGCAGCC CCGACGCGGG CGCGCTCAGC GCCTGA
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Protein sequence | MANIISLGGL QVASRDELGQ AMAGGCTASS CGTKAGPADM DPATWAKVKD HPCYSEEAHH YFARMHVSVA PACNIQCNYC NRKYDCANES RPGVVSERLT PEQAARKVLA VAAEVPQLSV LGIAGPGDAA YDWKKTKATF DKVQSQLPDI KLCLSSNGLA MPDHVEEIVA MNIDHVTLTI NTLDPEVGAK IYPWVFFRGK RHEGVEGAAI LLARQMEALD MLVARGVLVK VNSVLIPGIN DAGMVELNRE VKARGAFLHN IMPLISDPAH GTHFGLTGQR GPTAAELRAV QDQCGDGANL MKHCRQCRAD AVGMLGEDRG QEFTLDKLPE TVAEDGEEKR AAYRDWVARE RADRRAATEA AQAEAAALAA PPMRVAVCTK GGGRINQHFG HATEFQIYEV DAGGVRFLTH RRADNYCVGG HGESDRLTEI VRTLDGVPVV LCARIGEGPR SRMAEAGIEV IDACAMDYIE TALLDLYADR NRSPDAGALS A
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