| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0484 |
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| Symbol | |
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| ID | 3718647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2218676 |
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| End bp | 2219956 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640071693 |
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| Product | TRAP dicarboxylate family transporter DctM subunit |
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| Protein accession | YP_353557 |
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| Protein GI | 77464053 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.424428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGCTCT TCATCCTGTT CGGAAGCTTC GTCTTCCTTC TCCTGATCGG CACGCCTGTC
GCCTTCTGCC TCGGCGTGTC GAGTTTCCTC ACCGTGCTCT ATCTGGGCCT GCCGCCGGTC
GTGGTGTTCC AGCGCCTCAA CTCGGGCGTC TCGGTCTATG CGCTGATGGC CATCCCCTTC
TTCATCTATT CGGGCGATCT GATGGTGCGG GGCGACATCG CCCGACGGCT CGTGGCGCTG
GCAGGCGCGC TGGTCGGCCA CCTCCGGGGC GGGCTCGGAC AGGTGAACGT CGTGGCCTCG
GTCATGTTCG GCGGCGTCTC GGGCTCGGCC GCGGCGGATG CCTCGGCGGT GGGCGGCCTC
ATGGTGCCGC AGATGAAGGC CCGCGGCTAC GGCGTCGACT ATGCCGTGAA CCTGACCGTC
GTGGGCTCGA TCATCGCGCT GATGATCCCG CCCTCGCACA ACATGATCAT CTATTCCATC
GCCGCGGGCG GCCGGATCTC GATCGCGGAC CTCTTCACGG CAGGCATCAT CCCGGGCCTC
CTGCTCGCGC TGGGGCTGAT GGTGGCGGCC TATTTCGTGG CCCGCCGCCG CGGCTATCCG
ACCGAGCGCT TTCCGGGGCT GCGCGCGCTC GGTGCCATCT TCGTGAGCGC CGTGCCGGGG
CTCATCCTCG TCGCGCTGAT CTTCGGCGGC GTGCGCTCGG GCATCTTCAC CGCCTCGGAA
AGCGCCAACA TCGCCGTGGT CTATGCGCTG CTCGTCACCA TCCTGATCTA CCGCACTCTC
ACGTGGTCCG AGTTCGTCCA TGCCACCATC GGCGCGGTGC GCACGACGGC CATGGTGCTG
CTCGTGATCG GCTGCGCGGC CTCGTTCGGC TGGCTTCTGG CCTATCTCAA GGTGCCGACG
GCGCTGGTGG CCTTCATGCA GGGGCTGTCG GACAATCCGC TGGTGATCCT GCTGCTCATC
AACGTGGCGC TCCTGGTGCT CGGCACCTTC ATGGACATGT CGCCGCTGAT CGTCATCACG
ACGCCGATCT TCCTGCCGGT GGCGCAGGCC TTCGGGGTGG ATCCGGTGCA TTTCGGCGTC
ATCCTGATCC TGAACCTCGG GATCGGCCTC TGCACGCCGC CCGTCGGGGC CGTGCTCTTC
GTGGGCTGCG CCGTGGGGCG GATCTCGATC TGGACGGCGA TGCGCACCAT CTGGCCCTTC
TACGGGGCGG CCCTCGCCGT CCTGCTGCTC GTGACCTACA TCCCGGCGCT GTCGCTCTGG
CTGCCGGCCC AATTCCGCTG A
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| Protein sequence | MELFILFGSF VFLLLIGTPV AFCLGVSSFL TVLYLGLPPV VVFQRLNSGV SVYALMAIPF
FIYSGDLMVR GDIARRLVAL AGALVGHLRG GLGQVNVVAS VMFGGVSGSA AADASAVGGL
MVPQMKARGY GVDYAVNLTV VGSIIALMIP PSHNMIIYSI AAGGRISIAD LFTAGIIPGL
LLALGLMVAA YFVARRRGYP TERFPGLRAL GAIFVSAVPG LILVALIFGG VRSGIFTASE
SANIAVVYAL LVTILIYRTL TWSEFVHATI GAVRTTAMVL LVIGCAASFG WLLAYLKVPT
ALVAFMQGLS DNPLVILLLI NVALLVLGTF MDMSPLIVIT TPIFLPVAQA FGVDPVHFGV
ILILNLGIGL CTPPVGAVLF VGCAVGRISI WTAMRTIWPF YGAALAVLLL VTYIPALSLW
LPAQFR
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