Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0467 |
Symbol | ubiD |
ID | 3718746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 2201698 |
End bp | 2203191 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640071676 |
Product | 3-octaprenyl-4hydroxybenzoate decarboxylase |
Protein accession | YP_353540 |
Protein GI | 77464036 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.719328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAGCC TGCCCATCTT CCCGGATCTC CGGGCCTTTC TCGACTGGTG CGCCCGAAAG GGCGACCTCT CCCGGATCGC CGAGCCGGTC TCGCTGCGGC ATGAAACCAC AGCCGTGGCC TCGAAGATCC TGCGCGGCGG CGGCCCCGTG CTGCGGTTCG AGAGCCTGCG CGACACCTCG GCCACCATGC CGCTCGTGGC CAACCTCTTC GGCACGCGCG AGCGGGTGGC GGCGGGTCTC GGCCTCGGGC TCGAGCAGAT CCCCGAGCTC GGCGCCTTCC TCGCCGCCCT GCGAGCCCCT GCTCCGGTGG CGGGGATGCG CGACGCGCTC TCGCGCTGGC CGCAGCTTCA GGCCGCGCTG AACACGCGCG CGAAGATCGT GCGGTCGGCC GAGGCGCAGG AGGTGGTCCA CGAGGGTGCC GCGGTCGATC TCGGCATGAT CCCGGTGCCC ACCTGCTGGC CGGGCGATGC GGGCCCTCTG GTGACATGGC CCGTCGTGCT GACGCGGCCG CACGGCACCT CCGCCGAAGA GACGCTGCAC TACAATGCCG GCGTCTACCG CGCGCAGGTG ATCGGGCGCG ACCGGCTCAT CATGCGCTGG CTCGCCCATC GCGGCGGCGC CGGGCACTGC CGCAGCTGGA TGCGTGCGGG CGAGCCGATG CCGGTGGCGC TGGCGCTCGG CTGCGATCCG GCGCTCCTTC TGGCCGCGGC GCTGCCCCTC CCTGAGCAGG TGTCCGAGCT GACCTTCTCG GGCGTGCTCC GGGGCGCGCG GACGCCGCTG GTGGCGGGCC GCACCGTGCC GCTGATGGTG CCCGCCACCG CCGAGATCGT GGTCGAGGGC TGGGTCCACC CCGGCGACAT GGCGCCCGAG GGCCCCTTCG GCGACCACAC CGGCTATTAC AATTCGGTCG AGGATTTTCC CGTGCTGCGG GTCTCGGCCA TCACCCACCG CAAGGATCCG CTTTACCTCA CCACCCACAC GGGCCGCCCG CCGGACGAGC CCTCGGTCAT CGGCGAGGTC TTCAACGATC TCGCCATGCC GGTCTTCCGC CAGCAGATCC CCGAGGTGAA GGATCTCTAC CTGCCCCCCG CCGCCTGCTC CTACCGCATC GCCATCGTCT CGATCGACAA GCGCTATCCC GGTCAGGCGC GGCGGGTGAT GATGGCGCTC TGGGGGATGC TGGCGCAATT CTCCTACACC AAGATGGTGA TCGTGGTGGA TGAGGACATC AACCCGCGCG ACTGGGACGA TGTGGCCTGG GCGATGGCGA CCCGGATGGA CCCGTCGCGC GACGTGGTGC TGCTCGAGAA GACGCCGATG GATTACCTCG ACTTCGCCTC GCCCGAGCCC GGCCTTGCCG GCAAGATCGG GATCGACGCC ACCAACAAGA TCGGCCCCGA GACCCATCGC GAATGGGGCG AGGTCATGAC GCAGTCGCCC GAGGCCGAAG CCTTCGCCGA CCGGCTGATC GCGAAGCTGA GGATCGGAGC ATGA
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Protein sequence | MRSLPIFPDL RAFLDWCARK GDLSRIAEPV SLRHETTAVA SKILRGGGPV LRFESLRDTS ATMPLVANLF GTRERVAAGL GLGLEQIPEL GAFLAALRAP APVAGMRDAL SRWPQLQAAL NTRAKIVRSA EAQEVVHEGA AVDLGMIPVP TCWPGDAGPL VTWPVVLTRP HGTSAEETLH YNAGVYRAQV IGRDRLIMRW LAHRGGAGHC RSWMRAGEPM PVALALGCDP ALLLAAALPL PEQVSELTFS GVLRGARTPL VAGRTVPLMV PATAEIVVEG WVHPGDMAPE GPFGDHTGYY NSVEDFPVLR VSAITHRKDP LYLTTHTGRP PDEPSVIGEV FNDLAMPVFR QQIPEVKDLY LPPAACSYRI AIVSIDKRYP GQARRVMMAL WGMLAQFSYT KMVIVVDEDI NPRDWDDVAW AMATRMDPSR DVVLLEKTPM DYLDFASPEP GLAGKIGIDA TNKIGPETHR EWGEVMTQSP EAEAFADRLI AKLRIGA
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