| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0329 |
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| Symbol | |
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| ID | 3719089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2056160 |
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| End bp | 2057170 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640071541 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_353406 |
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| Protein GI | 77463902 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.832493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGT CGGACGATGA GGAGGCGCGG CTCGCAGCCC TCCAGCGCTA CGAAATTCTC
GACACCGGCC CCGAGTCCGA ATTCGACCTC ATAACCGACC TGCTCCGCTC CATCTATGCC
GTGCCCCTTG CGGTGATGAG CCTGATCGAC GGCGACCGCC TGTGGGTCAA GTCGGTTCAG
GGTGGCGAGC GCCGCGAGGT TCCCCGCTGC GACACCTTCT GCGACGTGGC GATCCGTGGC
AAGAAGGTGC TGCAGATCGT CGATGCCCAG AGCGACCCGC GCTACCGGGA CAATCCCTAT
GTCCGGGGTG AGCCCGGGAT GCGCAGCTAC CTCGGCGCGC CGCTCACCAC GCCCGACGGC
TACAACATCG GCACGCTCTG CGTGATCGAC ACGATCCCCC GCGACTATAC CAGCGTCGAC
CGGGAGGTGC TGGCCAACCT CGCCAAGCTC GCCGTCATCC ATCTGGAGCT TCGGCTGCAG
GCGACCGAGG ATCAGCAGAC CAGCGCCTCG ACGCGCCGGG CTTTCCTCTC GGTCCTGCGG
CGCGCGATGG AGCGGATGCG CCGGGCGTCG CAGAATTCGA CGCTCGTGAC CTTCGATCTC
GACCATCTCC GCGACATCAA CGAGACCTAC GGCCATGCCT TCGGCGACGT GGTGCTGGCG
ACCGTGGCCC GCACCATCCG CAACACGATC CGCCGCGGCG ACCATCTGGG CCGGCTCGGC
GGCGAGGAGT TCGGGATCTT TCTGGAAGGC GCCACCCCGG ATGTCGCCTT CCGCGTCACC
GAGCGGCTGC GCCAGGCCAT CGAGGACACG CGCTTTCCGG GCCATCCCGA GGCACGGGTC
ACGGCGAGCT TCGGCATCGC GCCCTGCAGC CTGCACCATG CCACCGCCGA GGCCTGGGTC
GCCGCGGCGG ACGAACTGGT CAGAAGTGCC AAGAGCGCCG GCCGCAACCG GAGCGAAATG
ATCCTCGACC CGGACCGGGA AGGCGCGGTC AGCGCCCTCC GCCTGCACTG A
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| Protein sequence | MGKSDDEEAR LAALQRYEIL DTGPESEFDL ITDLLRSIYA VPLAVMSLID GDRLWVKSVQ
GGERREVPRC DTFCDVAIRG KKVLQIVDAQ SDPRYRDNPY VRGEPGMRSY LGAPLTTPDG
YNIGTLCVID TIPRDYTSVD REVLANLAKL AVIHLELRLQ ATEDQQTSAS TRRAFLSVLR
RAMERMRRAS QNSTLVTFDL DHLRDINETY GHAFGDVVLA TVARTIRNTI RRGDHLGRLG
GEEFGIFLEG ATPDVAFRVT ERLRQAIEDT RFPGHPEARV TASFGIAPCS LHHATAEAWV
AAADELVRSA KSAGRNRSEM ILDPDREGAV SALRLH
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