Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0251 |
Symbol | |
ID | 3719393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 1974662 |
End bp | 1976062 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640071459 |
Product | Outer membrane efflux protein |
Protein accession | YP_353324 |
Protein GI | 77463820 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.608595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGA TCAGACTGTG GGCCGTGGCG ACCTGCTCGG CTCTGGCGGT GATGGCCTCG TCCGCGGCAC AGGCGGAGAC GCTCGCCGAT GCCCTCATCT CCGCCTACCG CAACAGCAAC CTGCTCGAAC AGAATCGCGC GCTTCTGCGG GCGACCGACG AGGATGTGGC GGTGGCCGTC GCGGCTCTGC GCCCCGTCGT GCAGTTCGTC GCGCAATCGA CCTACAGCTT CCAGCGGGTT CATGCGGATG CGACGCTCCT GACCCCTGCC GGGCGGACCA ACGTCGAGAA CCTGAACTCC TCGGTCGGGC TCACCGCCTC GATGACGCTC TATGACTTCG GGCGAAATGC GCTCGCCGTC GAGGCCGCCA AGGAGACGGT GCTCGCCACC CGCGAGGCGC TGGTGCAGGT CGAGCAGAAC GTGCTGCTCG ATGCGGTCAA TGCCTATGTG CAGGTGCAGC TTGCGCAATC CATCGTCAAT CTGCGGCGCA ACAACCTCGG GCTGATCGAT CAGGAACTGC AGGCCGCGCA GGACCGGTTC GACGTGGGCG AAGTCACCCG CACCGACGTG TCGCAGGCGC AGGCCGCGCT GGCGGCCTCG CGGTCCGACC TGACCTCGGC CGAGGGCGAT CTCAAGGTGG CGCGCGAGGC CTACAAGGCC GCCGTGGGCC ATTATCCGGT CGATCTCGCG CCGCGTCCTG CCGCGCCGCG CACCGCCGCG ACCATGGAGG CGGCGCGCCA GGTGGCGCTC CGCGCCCATC CGCAGGTGCG GCAGGCCCAG CGTCAGGTGG CGGCGGCCGA TCTGAACGTG GCGCGCGCCA AGGCCGCGAT GCGTCCCTCG ATCAGCGCCG AGGCGAATGT GGGGCTCGAC GACGAGGGGC AGGAGTCGGC CAGCGTCGGC CTCTCCCTCC GGCACACGCT CTATGCCGGG GGCGAGTTGT CCGCGCTCTA CCGCCAGACG CTTGCCAACC TCGATGCGCA GAAGGCGAAC CTGCTGCAGA CCGGCGTGAA TGTGGCGCAG AATGTGGGCG TCGCCTGGTC GACGGTCGAG GTGGCCTCCG CCGCCATCGC CGCGGGGGAC GAGGAAGTCC GCGCTGCCCG CACCGCCTTC GAGGGCGTGC GCGAGGAAGC GACGCTCGGC GCCCGGACCA CGCTCGACGT GCTGAACGCC GAGCAGGACC TCCTGAACTC GCAGGCCGAC CGTCTCACCG CCGAGGCGCA GCGCTATGTG GGGATCTATC AGGTGCTGGC CTCGATGGGG CTCCTGACCG TCGAACATCT CAATCTGGGC ATCCCGACCT ACGATCCGGC AGCCTACTAC AACGCCGTGA AGCACGCGCC GGCCACCAGC GCGCAGGGCA AGCGGCTCGA CCGCGTGCTG AAGTCGATCG GCCGGAACTG A
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Protein sequence | MRKIRLWAVA TCSALAVMAS SAAQAETLAD ALISAYRNSN LLEQNRALLR ATDEDVAVAV AALRPVVQFV AQSTYSFQRV HADATLLTPA GRTNVENLNS SVGLTASMTL YDFGRNALAV EAAKETVLAT REALVQVEQN VLLDAVNAYV QVQLAQSIVN LRRNNLGLID QELQAAQDRF DVGEVTRTDV SQAQAALAAS RSDLTSAEGD LKVAREAYKA AVGHYPVDLA PRPAAPRTAA TMEAARQVAL RAHPQVRQAQ RQVAAADLNV ARAKAAMRPS ISAEANVGLD DEGQESASVG LSLRHTLYAG GELSALYRQT LANLDAQKAN LLQTGVNVAQ NVGVAWSTVE VASAAIAAGD EEVRAARTAF EGVREEATLG ARTTLDVLNA EQDLLNSQAD RLTAEAQRYV GIYQVLASMG LLTVEHLNLG IPTYDPAAYY NAVKHAPATS AQGKRLDRVL KSIGRN
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