Gene RSP_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_0251 
Symbol 
ID3719393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp1974662 
End bp1976062 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content69% 
IMG OID640071459 
ProductOuter membrane efflux protein 
Protein accessionYP_353324 
Protein GI77463820 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.608595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGA TCAGACTGTG GGCCGTGGCG ACCTGCTCGG CTCTGGCGGT GATGGCCTCG 
TCCGCGGCAC AGGCGGAGAC GCTCGCCGAT GCCCTCATCT CCGCCTACCG CAACAGCAAC
CTGCTCGAAC AGAATCGCGC GCTTCTGCGG GCGACCGACG AGGATGTGGC GGTGGCCGTC
GCGGCTCTGC GCCCCGTCGT GCAGTTCGTC GCGCAATCGA CCTACAGCTT CCAGCGGGTT
CATGCGGATG CGACGCTCCT GACCCCTGCC GGGCGGACCA ACGTCGAGAA CCTGAACTCC
TCGGTCGGGC TCACCGCCTC GATGACGCTC TATGACTTCG GGCGAAATGC GCTCGCCGTC
GAGGCCGCCA AGGAGACGGT GCTCGCCACC CGCGAGGCGC TGGTGCAGGT CGAGCAGAAC
GTGCTGCTCG ATGCGGTCAA TGCCTATGTG CAGGTGCAGC TTGCGCAATC CATCGTCAAT
CTGCGGCGCA ACAACCTCGG GCTGATCGAT CAGGAACTGC AGGCCGCGCA GGACCGGTTC
GACGTGGGCG AAGTCACCCG CACCGACGTG TCGCAGGCGC AGGCCGCGCT GGCGGCCTCG
CGGTCCGACC TGACCTCGGC CGAGGGCGAT CTCAAGGTGG CGCGCGAGGC CTACAAGGCC
GCCGTGGGCC ATTATCCGGT CGATCTCGCG CCGCGTCCTG CCGCGCCGCG CACCGCCGCG
ACCATGGAGG CGGCGCGCCA GGTGGCGCTC CGCGCCCATC CGCAGGTGCG GCAGGCCCAG
CGTCAGGTGG CGGCGGCCGA TCTGAACGTG GCGCGCGCCA AGGCCGCGAT GCGTCCCTCG
ATCAGCGCCG AGGCGAATGT GGGGCTCGAC GACGAGGGGC AGGAGTCGGC CAGCGTCGGC
CTCTCCCTCC GGCACACGCT CTATGCCGGG GGCGAGTTGT CCGCGCTCTA CCGCCAGACG
CTTGCCAACC TCGATGCGCA GAAGGCGAAC CTGCTGCAGA CCGGCGTGAA TGTGGCGCAG
AATGTGGGCG TCGCCTGGTC GACGGTCGAG GTGGCCTCCG CCGCCATCGC CGCGGGGGAC
GAGGAAGTCC GCGCTGCCCG CACCGCCTTC GAGGGCGTGC GCGAGGAAGC GACGCTCGGC
GCCCGGACCA CGCTCGACGT GCTGAACGCC GAGCAGGACC TCCTGAACTC GCAGGCCGAC
CGTCTCACCG CCGAGGCGCA GCGCTATGTG GGGATCTATC AGGTGCTGGC CTCGATGGGG
CTCCTGACCG TCGAACATCT CAATCTGGGC ATCCCGACCT ACGATCCGGC AGCCTACTAC
AACGCCGTGA AGCACGCGCC GGCCACCAGC GCGCAGGGCA AGCGGCTCGA CCGCGTGCTG
AAGTCGATCG GCCGGAACTG A
 
Protein sequence
MRKIRLWAVA TCSALAVMAS SAAQAETLAD ALISAYRNSN LLEQNRALLR ATDEDVAVAV 
AALRPVVQFV AQSTYSFQRV HADATLLTPA GRTNVENLNS SVGLTASMTL YDFGRNALAV
EAAKETVLAT REALVQVEQN VLLDAVNAYV QVQLAQSIVN LRRNNLGLID QELQAAQDRF
DVGEVTRTDV SQAQAALAAS RSDLTSAEGD LKVAREAYKA AVGHYPVDLA PRPAAPRTAA
TMEAARQVAL RAHPQVRQAQ RQVAAADLNV ARAKAAMRPS ISAEANVGLD DEGQESASVG
LSLRHTLYAG GELSALYRQT LANLDAQKAN LLQTGVNVAQ NVGVAWSTVE VASAAIAAGD
EEVRAARTAF EGVREEATLG ARTTLDVLNA EQDLLNSQAD RLTAEAQRYV GIYQVLASMG
LLTVEHLNLG IPTYDPAAYY NAVKHAPATS AQGKRLDRVL KSIGRN