Gene RSP_0122 details

Gene Information

• Locus tag: RSP_0122
• Symbol: cerR
• ID: 3719688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 1836472
• End bp: 1837173
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640071325
• Product: LuxR family transcriptional regulator
• Protein accession: YP_353197
• Protein GI: 77463693
• COG category: [K] Transcription
• COG ID: [COG2771] DNA-binding HTH domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACATCA TCGACCTCAG CACAGTTGCC ACGGACGATG CGAGCTTCCT CGACTACATC 
GACCAGCTCT GCCAGAAGCT GGGCTTCGAC TATGCCTCCT ATGCGACAAC GAGTCCGATG 
ACGGGCGCGG TCCAGGGCTA TGCCAACTAT CCCGACAGCT GGAAGATGCA CTACATGCGG 
CGCAACCTGC ACCGCGTGGA TCCCACCATC CACAAGTCGG CGCTGAGCAT CGCCCCCGTG 
GACTGGAGCC GCTTCGAGCG CGACGAGCGT TTCCGGGCCG TGTTCTTTGC GGCCGAGGAT 
TTCGGCATCA CCCCTCAGGG GCTGACGGTG CCCGTCCGCG GCCCCTACGG CGACCGGGGC 
CTTCTGTCGG TGACGCGCAA CTGCGCCCGC CCGGAATGGG AGAAGCACAA GCGCGCCGTG 
ATCGGCGAGC TGCAGGTTGC GGCCGTCCAC CTGCACGATG CGGTCATGCG GTCGGACGTG 
ATCTCACGCG CCCTGCGCCA GCCGAGGCTC TCCACGCGCG AGATCGAGGT CCTGCAATGG 
GCGGCGGCGG GCAAGTCGCA GACGGACATC GGCGACATCC TCGGCATCTC GCACCGCACG 
GTCGAGGTGC ACCTGCGCTC GGCGCGCGAG AAGCTCGGCA CCCTCTCGAC GGTGCAGGCC 
GTGGGCCGTG CGATCGGGCT GGGTCTGGTC TATCCGAGGT GA 

 

Protein sequence

MDIIDLSTVA TDDASFLDYI DQLCQKLGFD YASYATTSPM TGAVQGYANY PDSWKMHYMR 
RNLHRVDPTI HKSALSIAPV DWSRFERDER FRAVFFAAED FGITPQGLTV PVRGPYGDRG 
LLSVTRNCAR PEWEKHKRAV IGELQVAAVH LHDAVMRSDV ISRALRQPRL STREIEVLQW 
AAAGKSQTDI GDILGISHRT VEVHLRSARE KLGTLSTVQA VGRAIGLGLV YPR