| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0090 |
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| Symbol | smoC |
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| ID | 3719921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 1800089 |
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| End bp | 1801042 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640071293 |
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| Product | operon regulator SmoC |
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| Protein accession | YP_353166 |
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| Protein GI | 77463662 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0568695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACC GGCCCGAGAG CGAGCCGACG CCCCTCGACG ACGCCGCACG CGCGGGCTGG
CTCTATTACG TCGCAGGCCT GACGCAAGAC CAGATCGCGC GGGAACTCGG CACCTCGCGC
CAGAGGGCGC AGCGACTGGT GAGCCGGGCC ATCTCCGAAC GGCTGATCCA TGTCCGGCTC
GAGCATCGGG TCTCGGGCTG CCTGCATCTG GAAGCCGCTC TGATCCGACG CTTCGGGCTG
AAGCTGGCCC GCGTGGCGCC GAGCCTCGGG TCCGAGGTGG ATCCCCTGCC CTCCATCGCC
CCCACCGCCG CCGCCGAGGT GGAGCGGGTG CTGCGCTCGG AGCGGCCGAT GGTGGTGGCC
TTCGGCACCG GCCGGTCGCT GCGCGCCACC GTCGAGGAGA TGACCTCGAT GGTCTGCGAG
CAGCACAAGA TCGTGTCGCT CAACGGGAAT ATCTCGGCGG ATGGCTCGGC CTCCTACTAC
GATGTGATCT TCCGCATCGC CGACCGTGTG CGCGCGCCGC ACTATCCGAT GCCGATGCCC
GTCATCGCGC AGGATGCGGC GGAGCGGGAG CTGTTTCATG CGCTGAAGCC CGTGCAGTCG
GTGCTGCGGC TTGCCCGCAA TGCCGATGTG ACCTTCGTCG GGCTGGGACA GATGGGCGAG
GACGCGCCGC TCCTGAAGGA CGGGTTCATC ACGCCCGACG AACTGGCCGA GATGCAGGAG
CTGGGCGCGG TCGGAGAGGT GGCGGGATGG GTCTTCGACT CGGAGGGCCG CTACCTCGAA
ACCAGCATCA ATCAGCGAGT TGCGGGCGTC CGTGTCGAAC TTTCCGAGGA TCGGACAGTG
GTCGCCATCG CAGGCGGCAG ACGCAAGCTC GCGGCGCTGC ACGCAGGCCT AAGGGGCCGT
CTTTTCAACG GCCTGATCAC CGACGAGCTC ACGGCGCAGG CACTTCTGTC CTGA
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| Protein sequence | MIDRPESEPT PLDDAARAGW LYYVAGLTQD QIARELGTSR QRAQRLVSRA ISERLIHVRL
EHRVSGCLHL EAALIRRFGL KLARVAPSLG SEVDPLPSIA PTAAAEVERV LRSERPMVVA
FGTGRSLRAT VEEMTSMVCE QHKIVSLNGN ISADGSASYY DVIFRIADRV RAPHYPMPMP
VIAQDAAERE LFHALKPVQS VLRLARNADV TFVGLGQMGE DAPLLKDGFI TPDELAEMQE
LGAVGEVAGW VFDSEGRYLE TSINQRVAGV RVELSEDRTV VAIAGGRRKL AALHAGLRGR
LFNGLITDEL TAQALLS
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