Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0087 |
Symbol | |
ID | 3719918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 1797908 |
End bp | 1798540 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640071290 |
Product | two component transcriptional regulator, LuxR |
Protein accession | YP_353163 |
Protein GI | 77463659 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.197031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGA CGCCCCAAAA GCTCAGCGTT CTCATTGCCG ACGATCACGA GATGGTCGTC GAGATGTTCT CGCTCTTTTT GACCGCATCC TCGGAGATGA CCGTGAAGAC CGCCAAGAGC CTCGACGAGG CTCTCGAGCG GATCAAGGAA CACGGGCCCT TCGACGTCAC CCTTCTCGAT CTGAACATGC CCGGAATGAA CGGGGTCGCC GGCCTCGTGC GGGCGATCAA GCTGTCCGCG GGCAAGCCGG TCGCGATCCT GACCTCGAAC CCGACCCCGC GGATGGTGGA TGAGATCCTT GCTACCGGCG CCTCGGGGAT CGTGCTCAAG ACGACGCCGG TGCGCAGCCT CGGCAATGCG ATCCGGTTCA TGCATGCGGG CGAGCATTAC CTGCCGCTCG AGCTGGCGCG TGATCGGCGC CAGGCCCCCG ACAGCTCGGG CGGACGGCTT ACGGAAAAGG AGATGCTCGT CATGTCCTAT CTGGCGGAAG GCCGCCAGAA CAAGGAGATA GCGCACGGGC TTAATCTTGC CGAACCGACG ATCAAGATGC ATGTGAAGTC GATCTGCAAG AAGCTGGGCG CCACGAACCG CACGCAGGCC GTGGTGACGG CACGCAATCT CGGCATCATC TGA
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Protein sequence | MTQTPQKLSV LIADDHEMVV EMFSLFLTAS SEMTVKTAKS LDEALERIKE HGPFDVTLLD LNMPGMNGVA GLVRAIKLSA GKPVAILTSN PTPRMVDEIL ATGASGIVLK TTPVRSLGNA IRFMHAGEHY LPLELARDRR QAPDSSGGRL TEKEMLVMSY LAEGRQNKEI AHGLNLAEPT IKMHVKSICK KLGATNRTQA VVTARNLGII
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