Gene RSP_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_0087 
Symbol 
ID3719918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp1797908 
End bp1798540 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content62% 
IMG OID640071290 
Producttwo component transcriptional regulator, LuxR 
Protein accessionYP_353163 
Protein GI77463659 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.197031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGA CGCCCCAAAA GCTCAGCGTT CTCATTGCCG ACGATCACGA GATGGTCGTC 
GAGATGTTCT CGCTCTTTTT GACCGCATCC TCGGAGATGA CCGTGAAGAC CGCCAAGAGC
CTCGACGAGG CTCTCGAGCG GATCAAGGAA CACGGGCCCT TCGACGTCAC CCTTCTCGAT
CTGAACATGC CCGGAATGAA CGGGGTCGCC GGCCTCGTGC GGGCGATCAA GCTGTCCGCG
GGCAAGCCGG TCGCGATCCT GACCTCGAAC CCGACCCCGC GGATGGTGGA TGAGATCCTT
GCTACCGGCG CCTCGGGGAT CGTGCTCAAG ACGACGCCGG TGCGCAGCCT CGGCAATGCG
ATCCGGTTCA TGCATGCGGG CGAGCATTAC CTGCCGCTCG AGCTGGCGCG TGATCGGCGC
CAGGCCCCCG ACAGCTCGGG CGGACGGCTT ACGGAAAAGG AGATGCTCGT CATGTCCTAT
CTGGCGGAAG GCCGCCAGAA CAAGGAGATA GCGCACGGGC TTAATCTTGC CGAACCGACG
ATCAAGATGC ATGTGAAGTC GATCTGCAAG AAGCTGGGCG CCACGAACCG CACGCAGGCC
GTGGTGACGG CACGCAATCT CGGCATCATC TGA
 
Protein sequence
MTQTPQKLSV LIADDHEMVV EMFSLFLTAS SEMTVKTAKS LDEALERIKE HGPFDVTLLD 
LNMPGMNGVA GLVRAIKLSA GKPVAILTSN PTPRMVDEIL ATGASGIVLK TTPVRSLGNA
IRFMHAGEHY LPLELARDRR QAPDSSGGRL TEKEMLVMSY LAEGRQNKEI AHGLNLAEPT
IKMHVKSICK KLGATNRTQA VVTARNLGII