| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0085 |
|---|
| Symbol | |
|---|
| ID | 3719916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 1794433 |
|---|
| End bp | 1797099 |
|---|
| Gene Length | 2667 bp |
|---|
| Protein Length | 888 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640071288 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_353161 |
|---|
| Protein GI | 77463657 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.408662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC GCCCCCGCAT ACCGGACGGA GGCGAGCGGG GAGCAGAGGT TCAGGCCATG
TTCTCCGAAA GCCGCGACAC GGCTCCGGGG GGCGTGTTCG AGCGCTGGAC GGGGTATGTG
CTCGTCCTCG CGGTCGGCGT CACGGCTCTG GTGGCGGCGA TCTTCATCTT TTCCGACATC
GACAAGCAGC TCGAGCAGAA TCGGGTCGCC CATCTCGACA ACCGGACCTG GGTGCTCGCG
CAGTTCGAGG TGGATGTGCT GAATCTCGCC TCGGCGGCGC AGATGGCCGC CTATCGGTCG
GACGATCCGG CCCGACTCGA CGAGCTCCGC AAGAGGTTCG ACATCCTCTA CAGCCGCGTG
GACATCGTCC GCGGATTCGA AAGCGGCACC ATTGCACCGC TCGAGGCCGA CGTGCTGCCG
ATCTTCGACG GGCCGGAGGG GTTCTTCGCC CGCTGGATCC CCGTCATCGA CGGGCCGGAT
GCGGACCTGA GAGCCGCTCT TCCGCAGCTG ATCGGGGAGC TCGAGAGGGA TGCGGGATCG
GTCCGCTCGG GCGTGGTGCG CGCGCTCGGG GAAGTGATGA CCGTCTCGGA CGCGCGGCGC
GCGACGCTGC GCCAGTCGCT CCAGACGTTC GCACTGGCGG CCCTCGGACT TCTGGGGCTG
ATGGGGGTGC TGATCGCCGT GGTGATCGTG CAGAGCAACG CCCGCCGTCG CCGCGGAATG
CTGCTCGAAC GGTCGGTCCA CAACCTGCGC GCCACCATCG AATCCTCGCT GGATGCGGTG
GTGGTGCTCG ACCACATGGG GCGGGTGGTC GAATGTAACC GTGCGGCGCT GGACATGTTC
CGCTGGTCGC CGCAGACGGC CGAAGGCACG AATTTCGTCG ACTATATCCG CACGGACGAT
GCTGACGGGT TGCTGCGTCC TCACGCGCGG GGCGAGGAAG AGGCGGAGCT GAACCCGACC
GGGCGCGACG GGCGCATTAC GATGATGGCG CAGCGCACGA ACGGCTCGAC CTTCCCGGTC
GAGGTCTCGG TGGCCGAGGC GCAGGGCGCG TCGCAGGATC CGTTCTTCAT CGCCTTCATC
CGCGACATCT CCGAGCGGCT CGAGCGTGAG GAGAGCCTGA AGAAGGCGCG CAATGACGCG
CTGAAGGGCG AAGAGGCCAA GTCGCGCTTC CTCGCGGTCA TGAGCCACGA GATGCGGACG
CCGCTCAACG GGCTGATGGC TGCCTCCGAC CTGCTGCAGA CCTCGACGGA TCTCACCGAC
AGACAGCGCT GGCTCACCGA CATCGTGATC GGCTGCGGCT CGGCGGCACT CGATCAGGTG
AACAACGTGC TCGAGCTGAC GCGGCTGTCG GACAAGGACG GCGCGAGCTA CGCCCGCACG
GTCTTCTCGC CGGTGGATCT CATCGAGGGG CTGATCCGGC AGAACCAGCC GCAGGCCGAC
AAGCGCGGCA ACAAGCTGTG GTTCGCGCAG CCCAAGAACC CGGTGCCGCC CGTGCTCGGG
CAGCGCCACC TGTTCCTGCG GGTGATGTAC AACCTGATCG GCAATGCCAT CAAGTTCACC
GACAATGGCA AGGTCTCGGT CGAGCTGCTC TGGCACCCGG GCCGCACGTC CGGCACCGTC
GACCTCTGCA TCCATGTGGG CGATACGGGC ATCGGCATTG CGGAGGAGCA TCTCGACACG
ATCTTCCGCA ATTTCGAGAC GCTCGACGCC TCCTACGGGC GCATCCGCGA AGGGACGGGC
CTCGGCCTCG GCATCGCCAA GCTCGCCGCC GAGACCATGG GCGGGCAGAT CGACGTCCAG
AGCAAGCTGG GGCTCGGATC CGTCTTCACG CTTCGCCTGC AGCTGCCCGT GGCGCAGGGG
GCCGAGGCGG CCCAGGAGGA GTTCGCGGAG GATGCGCCAT CGGCCGGGGA CGGCGCCCGC
GCGATCCTCG TGGTCGATGA CAATGCGATC AACCGTCAGC TCCTCGCCGA GATCCTGCGG
ATGGCGGGGC ACGAGGTGGC GACGGCCGAG GATGGCGCCG AGGCGGCCGA GGCGGCTGGC
GCCCGCCGCT TCGACCTGAT CCTGATGGAT GTCTCGATGC CGCGCGTGGA CGGGCTCGAG
GCCACGCGAC GGATCCGGCG GGCCGGCGCC TCGACCGACA CGCCCATCCT CGGTGCCACG
GCCCATGCCG ACCCGGACCG TGTCCCCGAC TTCCTCGCAG CCGGCATGAA TGACGTGCTG
GTGAAGCCCA TCACGCGCTC GGCGCTGTTT CGCGCCATCC GCCAGTTCAC GGAAACCAGC
GCCGCGGTCG AGGAGGTGCT CCCCGCTGGC GACCCGCCAC CCGACGATCT GCCGCTGATC
GACGCCGAGC TGCGGGCCGA CCTCGAGGGC AATCTCGGGC CCGATTATAT CGCGGGCATG
ATCGGCAGGG TGCTGAGCGA GACGGGCGAC GCGCTCCCCG AGATGCGGCG CCTGCACGAG
GCGGGCGATC ATCTGGCGGC CGCCAAGCTC GCGCACCGGA CGGCGGGGGC GGCGGCGGCC
GTGGGCCTCA TGGCGCTGCA CCGCAGCCTT GCGAGCTACG AAACGGCAGC CGACGCGTCG
AACACGGCTG AGGCCGCGCG CGCGCTCGAG AGCCTGCCCG CGACGCTGGA ACGCACCGCT
GCCGCCTGTC AGGCCACCGC CGCCTGA
|
|---|
| Protein sequence | MTERPRIPDG GERGAEVQAM FSESRDTAPG GVFERWTGYV LVLAVGVTAL VAAIFIFSDI
DKQLEQNRVA HLDNRTWVLA QFEVDVLNLA SAAQMAAYRS DDPARLDELR KRFDILYSRV
DIVRGFESGT IAPLEADVLP IFDGPEGFFA RWIPVIDGPD ADLRAALPQL IGELERDAGS
VRSGVVRALG EVMTVSDARR ATLRQSLQTF ALAALGLLGL MGVLIAVVIV QSNARRRRGM
LLERSVHNLR ATIESSLDAV VVLDHMGRVV ECNRAALDMF RWSPQTAEGT NFVDYIRTDD
ADGLLRPHAR GEEEAELNPT GRDGRITMMA QRTNGSTFPV EVSVAEAQGA SQDPFFIAFI
RDISERLERE ESLKKARNDA LKGEEAKSRF LAVMSHEMRT PLNGLMAASD LLQTSTDLTD
RQRWLTDIVI GCGSAALDQV NNVLELTRLS DKDGASYART VFSPVDLIEG LIRQNQPQAD
KRGNKLWFAQ PKNPVPPVLG QRHLFLRVMY NLIGNAIKFT DNGKVSVELL WHPGRTSGTV
DLCIHVGDTG IGIAEEHLDT IFRNFETLDA SYGRIREGTG LGLGIAKLAA ETMGGQIDVQ
SKLGLGSVFT LRLQLPVAQG AEAAQEEFAE DAPSAGDGAR AILVVDDNAI NRQLLAEILR
MAGHEVATAE DGAEAAEAAG ARRFDLILMD VSMPRVDGLE ATRRIRRAGA STDTPILGAT
AHADPDRVPD FLAAGMNDVL VKPITRSALF RAIRQFTETS AAVEEVLPAG DPPPDDLPLI
DAELRADLEG NLGPDYIAGM IGRVLSETGD ALPEMRRLHE AGDHLAAAKL AHRTAGAAAA
VGLMALHRSL ASYETAADAS NTAEAARALE SLPATLERTA AACQATAA
|
|---|
| |