Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0065 |
Symbol | fliR |
ID | 3719972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 1770625 |
End bp | 1771434 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640071267 |
Product | flagellar protein FliR |
Protein accession | YP_353140 |
Protein GI | 77463636 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAGCG CCGCCGCCCT GCCCGCGCTG GAGTTGCCCG GCCTCCTGTC GCTCCTGACC GGCGCCTTCG TGGCGAGCCT GCGGATCGGG GCCTTCCTCA TCGCCTCGCC CGCCTTCGGC GGCCGCTTCG TGCCGCTGCC CGTCAGGATC GTGGCGACGG TGATCCTCAC CCTGCCGGTG CTGGGCCGGG TGGAGCTGCC CCCGCCGGAG GAGCTGGCCT CGCTCGCGGC CATCCCCCTC ATGATGCAGG AGATCGCGGT CGGCCTGTCG GCGGGGCTCG TGCTGACCAT CCTCTTCTCG GCCGCGGCCC TCGCCGGAGA CCGGATCGCC TCGACCGCCG GTCTGGGCTT CGCCGCGCAG ATCGATCCGT CGGCGGGCGG GCAGACGCCG GTCGTGGCGC AGATCTTCGG GCTGGCGCTG ACCACGGTCT TCCTTGCCCT CGACGGCCAT CTGACCGCGC TCGACATCCT CCTGCGCAGC TACGAGAGCC TGCCGCCGGG CGCGCCCTTC GCCCCGGGGC GCTTCCTCGA GGCCGGCATC GGCGCGGGCG GGCGCATGTT CCTCCTCGGC CTCCAGATCA TGATGCCGGT CGTGGCGGCG CTCATCCTCA TCAACGTCAC GATCGGGATC GTCACCCGCT CGGCGCCACA GCTCAATGTC TTTTCCTTCG GCTTCCCCGT GACCATGTCG GCCACGCTGA TCCTGCTGTT CCTGACCGCG CCCGGCACGA TGGGCGCCTT CTCGGGGCTG GTCGAGGAGA GCCTCACCGC GCTGGCGGGC CTTCTGGGGG TCGTCCATGG CCGAGGGTGA
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Protein sequence | MESAAALPAL ELPGLLSLLT GAFVASLRIG AFLIASPAFG GRFVPLPVRI VATVILTLPV LGRVELPPPE ELASLAAIPL MMQEIAVGLS AGLVLTILFS AAALAGDRIA STAGLGFAAQ IDPSAGGQTP VVAQIFGLAL TTVFLALDGH LTALDILLRS YESLPPGAPF APGRFLEAGI GAGGRMFLLG LQIMMPVVAA LILINVTIGI VTRSAPQLNV FSFGFPVTMS ATLILLFLTA PGTMGAFSGL VEESLTALAG LLGVVHGRG
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