Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0053 |
Symbol | fliF1 |
ID | 3719960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 1759605 |
End bp | 1761317 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640071255 |
Product | flagellar FliF M-ring protein |
Protein accession | YP_353128 |
Protein GI | 77463624 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCCTT CTCCCACGCC TCCCGCCGTG CGCGGACCTG CCAGCGCACT GATCCCGCAG ATGCGCGGCA TGGTGGAGCA GATCCGCCGG TTCGGCGACC AGCCGGGCCT GCGCCGCGCC ATGCCCGCCA TCCTCATCCT CGCGGTGACG GTGCTCGCGC TGGCCGGATG GATCCTCCTG CGGGAACCCG CCCGCGTGAC GCTCTATCCC GGCCTGCCCG AGGCCGAGAA GGCGCGCGTG ATCGACAGCC TGACCGGCGG CGGCATCGCG GCCGTGATCG ACGAGCGCAC CGGCGAGGTG GCGGTGCCGG GCGCCGACTA TCACCGCGCG CGGATGCTGC TCGCGGCCCA GGGCCTGCCG CAGGGTCTGC CCGACGGGAA TGCGCTTCTG AGCGATCTGC CGATGGGCAC CTCGAAATCG GTCGAGACGG CGCGGCTCCG GCAGGCGCAG GAGCTCGATC TCGCGCGGTC GATCACCGAG ATTTCCGCCG TCTCGGCCGC GCGCGTGCAT CTGGCGCTGC CCGAACGCTC GGCCTTCCTG CGCGAGAGCC AGCCGCCGCG GGCGAGCGTC TTTCTCCAGA TCGTGCCGGG GCGCACGCTC GACGGCGCGC AGGTCGAGGC CATCGTGAAC CTCGTCTCCT CTTCGGTGCC GGGCATGGCG CGGCAGGATG TGACGGTGGT CGACCAGATG GGGCGGCTCC TGTCGCGGGG CTCGGACGAT CCGGCCGTGC TGCTGAACGA CCGCCAGCTC CAGCACCGGG TGCAGCTCGA GACGCTCTAC CGCAACCGGA TCGAGAGCCT GCTCACCCCT ATCGCGGGGC CGGGCAACCT TGCGGTGCAG GTCACGATCG ACATGGATTT CACCCGCCAG GAGATCCGCG AGGAGCAGGT CGACCCCGAC CGCACCGCGC TGCTGGCCGA GCAAAGCCAG ATCGAGGAGA CGGCCGACCC GCAGGCCCGG GGCATTCCGG GCGCCGTGTC GAACAGCCCG CCGCCCGAGG CCGCGCTCGA GGCCGGCGCG CCGCCCACCG CCGCGGGCGA GGCGGCAACG CCGATGCGCA GCCGGTCGCA GAACTCGACC CGCAATTTCG AGGTGAGCCG CAAGGTCGAG ACCACCCTGC CCGCCACCGC CCGCATCGCG CGGGTGAGTG CGGCGGTCGT GGTGCGCGCC CAGCCGCAGC CCGCCGCCAC CGATCCCGCA GCCCCGCCGC CCCCGCTCCT GCCCGAGGCG CTGAAGGCCG ATCTCGAGCG GCTGACCCGC TCGGCGGTGG GCTTCGACGC CGACCGGGGC GATGTGGTGA CGATCACGGC CCAGCCCTTC CTCGACACGG TGGTGCCCGA GGCTTCCGGC TGGAGCGCCG AGCCGTGGCT CGCGGATCTG GCGCGGCAGG GCTTCCTTCT CGCGGCGCTG GCCGTGGTGG CGCTGGGCGT CGTGCGGCCG ATCCTGAACC GCGTGCTTCT GCCCGCACCC GCCGCAGCCG GCGCGCTGCC TCTGGGCGAA ACGGCGGTGG AAGTGGGCGA AGGCGAGAGC CTCGACGACG TACGCGCCCG CCTCAAGGCG CGTCAGGGGG CGCTGACCAA GAACATGCTG GATGCGGCGC GCAGCCACGA GGAGCAGATC CTCGTCATCC GCAAGCTCGT CGAGGAGGAC GAGGGCCGCA TCGCCACCAC CATCCGCCAG ATGATCGCGG CCGAGCTCGA CACCGTGAAG TGA
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Protein sequence | MAPSPTPPAV RGPASALIPQ MRGMVEQIRR FGDQPGLRRA MPAILILAVT VLALAGWILL REPARVTLYP GLPEAEKARV IDSLTGGGIA AVIDERTGEV AVPGADYHRA RMLLAAQGLP QGLPDGNALL SDLPMGTSKS VETARLRQAQ ELDLARSITE ISAVSAARVH LALPERSAFL RESQPPRASV FLQIVPGRTL DGAQVEAIVN LVSSSVPGMA RQDVTVVDQM GRLLSRGSDD PAVLLNDRQL QHRVQLETLY RNRIESLLTP IAGPGNLAVQ VTIDMDFTRQ EIREEQVDPD RTALLAEQSQ IEETADPQAR GIPGAVSNSP PPEAALEAGA PPTAAGEAAT PMRSRSQNST RNFEVSRKVE TTLPATARIA RVSAAVVVRA QPQPAATDPA APPPPLLPEA LKADLERLTR SAVGFDADRG DVVTITAQPF LDTVVPEASG WSAEPWLADL ARQGFLLAAL AVVALGVVRP ILNRVLLPAP AAAGALPLGE TAVEVGEGES LDDVRARLKA RQGALTKNML DAARSHEEQI LVIRKLVEED EGRIATTIRQ MIAAELDTVK
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