Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0028 |
Symbol | |
ID | 3720163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 1729383 |
End bp | 1730381 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640071224 |
Product | short chain dehydrogenase |
Protein accession | YP_353097 |
Protein GI | 77463593 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGACA GGCCGGTCGT GGTCATCACC GGAGGAACGG CGGGCGTGGG GCGTGCCCTC GCCAGAGCCT ACGCGCACCG CGGCTGGCGC GTGGCGGTTC TGGCGCGCGG ACAGGCGGGC CTCGCGGCCA CCGCCGCCGA CGTGGCCCGT GCCGGGGGCG AGCCCCTGAC CCTTGCGGCA GATGTCGCGG ACTCCGCCGC CGTCTTCGAC GCGGCCGACC GCGTGGTGGC CCGCTGGGGC CGCATCGACC TCTGGATCAA CAATGCGATG GTCACGGTCT TCGGCCCGGC CGAGCGCGCG ACGCCCGAGG AATATGCCCG CGTCACCGCC GTGACCTACC TCGGCACCGT CCATGGCACG CTCGCGGCGC TGCGCCACAT GCGCCCACGC GACCGCGGCA CCATCCTTCA GATCGGCTCG GCGCTGGCCT ACCGCTCGAT CCCCCTGCAG GCCGCCTATT GCGCGGCGAA GGCCGCCTGC CGGGGCTTCA CCGACTCGCT CCGGTCCGAG CTTCTGCATG AGAAGAGCCG CATCCGCCTC ACCATGGCGC AGCTCCCGGC CGTCGATACG CCGCAGTTCG ACTGGGCCCG CACCCATGTC CGCGGACGCC CGCAGCCCGT GCCCCCGATC CATACCCCCG AGGCCGTGGC CGAAGCGATC GCCGCCGCGG CCCGCACGGC CCCGCGCGAG ATCTGGATCG GCGCGCCCTC GATGCAGGCG ATCCTCGGCA CGATGGTGGC GCCGGGCCTC ATGGACCGGA TGATGGCGCG CAGCGCCTGG GACAGCCAGA TCGGTCCCGG AGACGCCCGC GCAGACAATC TCATGCAGCC GGTCGAGCGT GACATGGGCG CCGCAGGCCG CTTCGGCTCC GAAGCGTCCG ACCGGGTCGC GAGCCTCTCC GGCCCCACCG TCCGCGCAGG CCTTGCGGCC GGCGGCGTGC TGGTCGCGGC CGCGGCCCTC ACCGCCGCAG CGCTCCTCGC CCGCCGCCGC GACCCATGA
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Protein sequence | MQDRPVVVIT GGTAGVGRAL ARAYAHRGWR VAVLARGQAG LAATAADVAR AGGEPLTLAA DVADSAAVFD AADRVVARWG RIDLWINNAM VTVFGPAERA TPEEYARVTA VTYLGTVHGT LAALRHMRPR DRGTILQIGS ALAYRSIPLQ AAYCAAKAAC RGFTDSLRSE LLHEKSRIRL TMAQLPAVDT PQFDWARTHV RGRPQPVPPI HTPEAVAEAI AAAARTAPRE IWIGAPSMQA ILGTMVAPGL MDRMMARSAW DSQIGPGDAR ADNLMQPVER DMGAAGRFGS EASDRVASLS GPTVRAGLAA GGVLVAAAAL TAAALLARRR DP
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