Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0016 |
Symbol | |
ID | 3720151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 1717412 |
End bp | 1718218 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640071212 |
Product | ABC spermidine/putrescine transporter, inner membrane subunit |
Protein accession | YP_353085 |
Protein GI | 77463581 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGGGG GCGGGTTCCG CATCTATGCG CTGGCCTACC TGCTGTTCCT CTATGCGCCG ATCATCCTGC TGCCGCTCTT CGCCTTCAAC GAGGGGACGG TGATCGCCTT TCCGCTGACG GGCTTCAGCA CGAAATGGTT CGTGCAGGCC GCCCACCAGC CCACGCTCTG GCAGGCGGTG AAGAACAGCC TCATCATCGC GGGCTCGGCC TCGGTGCTGT CGACGGTGCT GGGCATCTTC GCGGCCCGGG CCTCCACGCG CTATCACTTC CCGGGCAAGG CGGGGCTGAT GGGCCTCATC ATGCTGCCGC TCGTGCTGCC CGAGATCATC GTGGCCGTGT CGCTCCTCGT CGTGCTGCTG GGCCTCGGGA TCAACCTCAC GATCTTCACG GTGATCCTCG GCCATGTGCT GATCTGCACG CCCTTCACCA TCGCGATCCT GACCTCGGCC TTCCAGTCGC TCGACCGCTC GCTCGAGGAG GCGGCCTACG ATCTGGGCGA GACCGCCGTC TCGACCTTCC GGCTCATCAT CCTGCCGCTG GTCATGCCGG GGATCATCTC GTCGCTCCTG ATCTCCTTCA CGATCAGCCT GGACGAGTTC ATCATCGCCT TCTTCCTCGC CGGCACCGAG CCCACGCTGC CGATCTACAT CTTCTCGCAG TTCCGCTTCC CGCAGGCGGT GCCCGTCATC ATGGCACTCG GCACGGTGCT CGTCGCCTGC TCGATCGTGC TGCTCGCCAC TGCCGAATAT TTCCGCCGCC GCGGCCTCGC CCGGTCCGGC GCCAAGGATA CCGGAGGCTT CCTGTGA
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Protein sequence | MKGGGFRIYA LAYLLFLYAP IILLPLFAFN EGTVIAFPLT GFSTKWFVQA AHQPTLWQAV KNSLIIAGSA SVLSTVLGIF AARASTRYHF PGKAGLMGLI MLPLVLPEII VAVSLLVVLL GLGINLTIFT VILGHVLICT PFTIAILTSA FQSLDRSLEE AAYDLGETAV STFRLIILPL VMPGIISSLL ISFTISLDEF IIAFFLAGTE PTLPIYIFSQ FRFPQAVPVI MALGTVLVAC SIVLLATAEY FRRRGLARSG AKDTGGFL
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