Gene RSP_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_0016 
Symbol 
ID3720151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp1717412 
End bp1718218 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID640071212 
ProductABC spermidine/putrescine transporter, inner membrane subunit 
Protein accessionYP_353085 
Protein GI77463581 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGGG GCGGGTTCCG CATCTATGCG CTGGCCTACC TGCTGTTCCT CTATGCGCCG 
ATCATCCTGC TGCCGCTCTT CGCCTTCAAC GAGGGGACGG TGATCGCCTT TCCGCTGACG
GGCTTCAGCA CGAAATGGTT CGTGCAGGCC GCCCACCAGC CCACGCTCTG GCAGGCGGTG
AAGAACAGCC TCATCATCGC GGGCTCGGCC TCGGTGCTGT CGACGGTGCT GGGCATCTTC
GCGGCCCGGG CCTCCACGCG CTATCACTTC CCGGGCAAGG CGGGGCTGAT GGGCCTCATC
ATGCTGCCGC TCGTGCTGCC CGAGATCATC GTGGCCGTGT CGCTCCTCGT CGTGCTGCTG
GGCCTCGGGA TCAACCTCAC GATCTTCACG GTGATCCTCG GCCATGTGCT GATCTGCACG
CCCTTCACCA TCGCGATCCT GACCTCGGCC TTCCAGTCGC TCGACCGCTC GCTCGAGGAG
GCGGCCTACG ATCTGGGCGA GACCGCCGTC TCGACCTTCC GGCTCATCAT CCTGCCGCTG
GTCATGCCGG GGATCATCTC GTCGCTCCTG ATCTCCTTCA CGATCAGCCT GGACGAGTTC
ATCATCGCCT TCTTCCTCGC CGGCACCGAG CCCACGCTGC CGATCTACAT CTTCTCGCAG
TTCCGCTTCC CGCAGGCGGT GCCCGTCATC ATGGCACTCG GCACGGTGCT CGTCGCCTGC
TCGATCGTGC TGCTCGCCAC TGCCGAATAT TTCCGCCGCC GCGGCCTCGC CCGGTCCGGC
GCCAAGGATA CCGGAGGCTT CCTGTGA
 
Protein sequence
MKGGGFRIYA LAYLLFLYAP IILLPLFAFN EGTVIAFPLT GFSTKWFVQA AHQPTLWQAV 
KNSLIIAGSA SVLSTVLGIF AARASTRYHF PGKAGLMGLI MLPLVLPEII VAVSLLVVLL
GLGINLTIFT VILGHVLICT PFTIAILTSA FQSLDRSLEE AAYDLGETAV STFRLIILPL
VMPGIISSLL ISFTISLDEF IIAFFLAGTE PTLPIYIFSQ FRFPQAVPVI MALGTVLVAC
SIVLLATAEY FRRRGLARSG AKDTGGFL