| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05388 |
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| Symbol | RSp0945 |
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| ID | 1223252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1191286 |
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| End bp | 1192281 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240805 |
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| Product | 2-hydroxyacid dehydrogenase |
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| Protein accession | NP_522506 |
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| Protein GI | 17549166 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCTT CCGTCCTCGT CACCCGGGCG ACGTTTCCCG ACATTGCCAA CCGCCTGCGC
GAACACTTTG ACGTGACGGA CAACCCGTCC GACGCGATCC TGAGCCCGTC GGAGCTGATC
GCACGGCTGC AAGGCAAGCA GGGCGTGATG AGCACCGGCA GCGAGCGCAT CGACGCGGCC
CTGCTCGATG CATGCCCCCA ACTCAAGGCC GTGTGCAATG TGGGCGTGGG CTACAACAAC
ATCGACGTGG CCGCCTGCAC GGCCCGCGGC GTGGTCGTGA GCAACACGCC CGACGTGCTC
ACCCAGACCA CCGCCGACTT CGGCTTTGCG CTGATGCTCG CCACCGCGCG GCGCATCACC
GAATCCGAAC GCTTCGTCCG GCGCGGCGAA TGGCAGAAGA CGGGGATCCA CGACCAGATG
CTCGGCAGCG ACATCTACGG CGCCACGCTG GGCATCCTCG GCATGGGGCG GATCGGCCAA
GCCATCGCCC GACGTGCCGC GTTGGGGTTC GAGATGCAGG TCATCTACCA CAACCGCTCG
CCGCTCGAGG CCGAAACCGA AGCCAGGGCG CATGCCCGCT ATGTCGACAA GGACACCCTG
CTGCGGGAAT CCGACCACCT CATCCTGGTG CTGCCCTACT CCCCCGAGGC CCATCACACG
ATCGGCGCCG CCGAACTGGC CAGGATGAAG CCGACCGCCA CACTGACCAA CATCGCTCGC
GGCGGCATCG TCGACGACGC AGCGTTGGCA CAGGCACTGC GCCAGGGCAC GATCGCGGCG
GCCGGGCTCG ACGTCTTCGA GGGCGAACCG CGCATTCACC CCGACCTGCT GGCCCTCGAC
AATATCGTGC TGACGCCGCA CATCGGCAGC GCGTCGGTCA ACACGCGCCG CGCCATGGCC
GCACTGACCG TCGACAACCT GATCGCCGCG CTCGGCTACG GGCCGCGGGC CGGCCAACCG
CCGACGCCCG TGAATCCGCA GGTGCTGCAG CAATAG
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| Protein sequence | MRPSVLVTRA TFPDIANRLR EHFDVTDNPS DAILSPSELI ARLQGKQGVM STGSERIDAA
LLDACPQLKA VCNVGVGYNN IDVAACTARG VVVSNTPDVL TQTTADFGFA LMLATARRIT
ESERFVRRGE WQKTGIHDQM LGSDIYGATL GILGMGRIGQ AIARRAALGF EMQVIYHNRS
PLEAETEARA HARYVDKDTL LRESDHLILV LPYSPEAHHT IGAAELARMK PTATLTNIAR
GGIVDDAALA QALRQGTIAA AGLDVFEGEP RIHPDLLALD NIVLTPHIGS ASVNTRRAMA
ALTVDNLIAA LGYGPRAGQP PTPVNPQVLQ Q
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