Gene RS05340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS05340 
SymbolRSp1295 
ID1223607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1644109 
End bp1645557 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content70% 
IMG OID637241158 
Producthypothetical protein 
Protein accessionNP_522854 
Protein GI17549514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCATG CCAATTGCCC GGCGTGCGGC GCGCCGGTGG AACTGAAGTC TGCCGCCGCC 
GTGATGGCGG TGTGCAGCTT CTGCAAGAGC ACGCTGCTGC GCGACGGCGA GACGCTCAAG
GACATCGGCA AGATGTCCGC CGTGCTCGAA GACTACGCGC GCGTGCAGAT CGGCACCACC
GGGCGCTACC AGGGCCGCGC GTTCACCGTG ATCGGCCGCA TCCAGCTGCG CTACGACGCC
GGCTTCTGGA ACGAGTGGTA CGCGCTGTTC GACGATGGCT CGGACGGCTG GCTGGCCGAG
GCCTCCGGGC AGGTGACGAT GACGCTGGCG AGCGGTCGGC CCGCCGATGC GGTGCCGTTC
GAATCGCTGC GGCCGGGCCA ATCGTATGAC GCCGACGGCA AGCGGTTCGT GCTGTCGGAC
GTGCGCGAGG CCGACTGCAC CGGCGGCGAG GGCGAGCTGC CGTTCCGCGT CGGGCAGGGC
TGGCGCGCGC GCGTGGCGGA CGGGCGCAGC AAGGACGCCT TCCTGACGCT CGACTATTCC
GACGGCACCG CGCCGGTGCT GTACCTGGGC GTGGCCACCT CGCTCAAGGC GCTGAACTGT
CAGTTGCTGC GCTCCGACCA GGACATCCGC GACAGCGCGG GGGCGCTGCC GGGCAAGCTG
GTCAACCTGG ACTGCCCGGC GTGCGGCACG AGCGTGCCTT TCAGCCCGGG CGTCACGACG
CACCTGCTGT GCCCGTCGTG CGGCAGCGCC GTCGATACCT CCGCCGCGCG CGCCGAGCTC
GTCGAGCGGG CGCGCTCGGT GCCGGAGGTC GTCACCACGC TGGACCTGGG CGCCAAGGCC
GTGATCGACG GCGCGCAATG GCAGATCATC GGTGTGATGC GGCGCACCGT CGTCAATGGC
GACGGCGAAT GGTTCGAATA CCTGCTGTAC AGCGCCAGCC GCGGTTTCCT GTGGCTGGTC
GAGACCGATG AGGGCTGGTC GCGCGCCCGG GTGCTCGAGC GCTGGCCGGA GACGGTCGAT
GCGGGCGGCG CCGTGCTCGA CGGCAAGCGC TACGCGCGCA GCGATGATTA CAGCGCGCGC
GTGAGCTACG CCGCCGGCGC CTTCAACTGG CGCGTCAAGA GCGGCGACGT GACCCGCGTG
ATCGAATACG GCGCCGCCGC CAACGGCCTG GCCGCCGAAA GCGACGCGCA TGAACTGAAC
TGGTCCCGCA GCACCCCGGT CTCGTCCGCC GAGATCCAGG CCTGGTTCGG CAAGACGGTG
GCCGAGCCCG TCAAGCCGGC CGACGGCAGT TACATGACGG TGGCGGTGGT GGCCTGCGTG
CTGCTCGGTC TGCTGAACCT GGTGCCGTTC TTCATGGCGC CGGGGTCGGT CGTCGTCATC
ACGCTGTTCG CGGCGGGGCT GCTGCTGTTG CCGGCGTGGC TGGCCGTCAA GGTCGGGGGC
GGGGAATGA
 
Protein sequence
MFHANCPACG APVELKSAAA VMAVCSFCKS TLLRDGETLK DIGKMSAVLE DYARVQIGTT 
GRYQGRAFTV IGRIQLRYDA GFWNEWYALF DDGSDGWLAE ASGQVTMTLA SGRPADAVPF
ESLRPGQSYD ADGKRFVLSD VREADCTGGE GELPFRVGQG WRARVADGRS KDAFLTLDYS
DGTAPVLYLG VATSLKALNC QLLRSDQDIR DSAGALPGKL VNLDCPACGT SVPFSPGVTT
HLLCPSCGSA VDTSAARAEL VERARSVPEV VTTLDLGAKA VIDGAQWQII GVMRRTVVNG
DGEWFEYLLY SASRGFLWLV ETDEGWSRAR VLERWPETVD AGGAVLDGKR YARSDDYSAR
VSYAAGAFNW RVKSGDVTRV IEYGAAANGL AAESDAHELN WSRSTPVSSA EIQAWFGKTV
AEPVKPADGS YMTVAVVACV LLGLLNLVPF FMAPGSVVVI TLFAAGLLLL PAWLAVKVGG
GE