Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05310 |
Symbol | RSp1265 |
ID | 1223577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1600968 |
End bp | 1602656 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637241128 |
Product | acetyl-coenzyme A synthetase |
Protein accession | NP_522824 |
Protein GI | 17549484 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.366721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCGC TGGAGGCATT CCTCCGGTGC CGCGACGCTC TGCTCGCGCA TCGGGAGGAC TACGACACCG CCGCGCGCGA CTTCGCATGG CCGGCGCTGG ACCGCTTCAA CTGGGCGCTT GACTATTTCG ACGGCATGGC GCGCGGCAAC GGGGCCACCG CGCTGTGGGT GCTCGACGAG CAGGGCGGCG AGGCGCGCCT GTCGTTCGCG CAGATGGCCG AGCGCTCGGC GCGCGTGGCC AACCACCTGC GCGCGCTCGG CGTGCGGCGC GGCGACCGCG TCATGCTGAT GCTCGGCAAC GTGCCGGCGC TGTGGGACGT GATGCTCGCC TGCATGAAGC TGGGCGCGAT CATCATCCCC GCGACCACGC TGCTGACGGC CGATGACCTG CGCGAGCGCA TCGCCATGGG CGAAGTCGGG CACGTGGTGG CCGGCGCCAC CGATTGCGCC AAGCTGGACG GGGTGGCCGG CACCTTCACC CGCATCGCGG CCGGGGCGGA CCGCGCGCCG GCCGGCTGGC ATCGGCTGGA GGACGCCTAT GCCGCGTCGC CCGAGTTCAC GCCCGACGCG CCGACGCAGG CGAGCGACCC GCTGCTGCTG TATTTCACCT CGGGGACCAC CTCGCGGCCC AAGCTGGTGA TGCACACGCA TGCGAGCTAC CCGGTCGGGC ATCTGTCGAC GCTGTACTGG ATCGGCCTGC GCCCCGGCGA TGTCCACTGG AACATCAGTT CGCCGGGCTG GGCCAAGCAT GCGTGGAGCT GCTTCTTCGC GCCATGGAAT GCCGGCGCCA CCGTGTTCGT CTACAACGCC GCGCGCTTCG AGGCCCGGGC GGTGCTGGAC GTGCTGTGCC GCGCGGGGGT CACGACGCTG TGCGCGCCGC CCACGGTCTG GCGCCTGCTG ATCCAGGAGG ACCTGGCCGC CTGGAAGCCC GCGCTGCGCG AGCTGGTCGG CGCCGGCGAG CCGCTCAACC CCGAGGTGAT CGAGCGCGTG CGCGCGGCGT GGGGCATCAC CATCCGCGAC GGCTACGGCC AGACCGAGAC CACCTGCCAG ATCGGCAACA GCCCCGGCCA GCCGGTCAAG CCGGGCTCGA TGGGCCGGCC GCTGCCGGGC TACCGCATCA CGCTGCGCGA TCCCGACGGC AACCCGGCCG ACGAGGGCGA GATCTGCATC GAACTGGACC CGCGCCCGAT GGCGCTGATG GCGGGCTACG CCGGCAACGC CGACAAGACC GCCGAGGCGA TGCGCGGCGG GGTGTACCAC ACCTCCGACA TCGCCGCGCG CGATGCCGAC GGCTATCTCA CCTATGTCGG CCGCGCCGAC GATGTGTTCA AGGCGTCCGA CTACCGTGTG AGTCCGTTCG AACTGGAGAG CGTGCTGATC GAGCACCCGG CCATCGCCGA AGCCGCCGTG GTGCCGAGCC CCGACCCGCT GCGCCTGGCC GTGCCCAAGG CCTTCCTGGT GCTGCGCGCC GGACACGTGG CCGGCCCCGA CCTGGCGCGC GACATCCTGC GGTTCTGCCG GGCCCGGCTG GCGTCATACA AGCGCGTGCG GCGCATCGAG TTCGCGGAGC TGCCCAAGAC CATCTCGGGC AAGATCCGGC GCGTCGAGCT GCGCCAGCGC GAAGCGGCCC GTCCGGAGAC GGGCCGCAAC CTGCATGAAT ACTGGGAAGA CGACTTCCCG GCCGACTGA
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Protein sequence | MTSLEAFLRC RDALLAHRED YDTAARDFAW PALDRFNWAL DYFDGMARGN GATALWVLDE QGGEARLSFA QMAERSARVA NHLRALGVRR GDRVMLMLGN VPALWDVMLA CMKLGAIIIP ATTLLTADDL RERIAMGEVG HVVAGATDCA KLDGVAGTFT RIAAGADRAP AGWHRLEDAY AASPEFTPDA PTQASDPLLL YFTSGTTSRP KLVMHTHASY PVGHLSTLYW IGLRPGDVHW NISSPGWAKH AWSCFFAPWN AGATVFVYNA ARFEARAVLD VLCRAGVTTL CAPPTVWRLL IQEDLAAWKP ALRELVGAGE PLNPEVIERV RAAWGITIRD GYGQTETTCQ IGNSPGQPVK PGSMGRPLPG YRITLRDPDG NPADEGEICI ELDPRPMALM AGYAGNADKT AEAMRGGVYH TSDIAARDAD GYLTYVGRAD DVFKASDYRV SPFELESVLI EHPAIAEAAV VPSPDPLRLA VPKAFLVLRA GHVAGPDLAR DILRFCRARL ASYKRVRRIE FAELPKTISG KIRRVELRQR EAARPETGRN LHEYWEDDFP AD
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