| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05073 |
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| Symbol | RSp1183 |
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| ID | 1223495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1504565 |
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| End bp | 1505641 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637241048 |
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| Product | putative hemolysin-type secretion transmembrane protein |
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| Protein accession | NP_522744 |
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| Protein GI | 17549404 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.179925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGGGCGG CATTTGCCGG GCTCGACGAA GTCGCCATCG GCGAGGGCAA GGTGACGCCG
GCCTCCAAGG GACAGGTCAT CCAGAGCCTG GAAGGCGGCA TCCTGTCCGA GCTGGCGGCG
CGCGAGGGCG ACGTGGTCGA GGCCGGCCAG AAGCTGGCCA CGCTGGACCC GGTGCAGGCC
CGCTCGTCGA TGGAAGAGGC GCTGGAGCGC ATCTCCGCGC TGCAGGCCCG CGCCGCGCGG
CTGCGCGCCG AGATGGACGA CCTGCCCGAG GTCACCTTCC CGCCCGAGCT GGCCAGGGAA
AAAGCCGTGA CCGACCGCGA GCGCCAGCTG TTCGCGGCCA ACCGGCGCGC CTTCCGCGAG
AACGTCGCCA ACCTGCGCGA GCAGTTGCGG CTGGCCGAGG ACGAACTGAA GATCGCGATG
CCGCTGCTGC GCACCGGCGC GACCAACGAG GTCGAAATCC TGCGGCTCAA GCAGCGGGCC
GCCGAGTTCG CCACCAAGCT CGCCGCCACG CAGAGCGAAT ACTACGTCGC GCTCAAGGCC
GACTACGCCT CCACCATGGC GGACCTCGGC CCCCTGCTCA AGGTGCGCGA AGGCCGCGCC
GACCAACTGC GCCGCACCGT CATCACCTCG CCCGCGCGCG GCATCGTCAA GGACATCCGG
GTCTCCACGA TCGGCGGCGT GGTGGGCGCG GGCGGCGTGC TGATGGAGAT CGTGCCGCTG
GACGACCAGT TGCTGATCGA AGCGCGCCTG AGCCCGCGGG ACATCGCCTT CATCCACCCG
GGGCAGGAGG CGACGGTCAA GATCACGGCC TTCGAGTCGT CCATCTACGG CTCGCTGCCG
GCCAGGGTCG AGCGCATCTC GCCGGACACG ATCGAAGACC AGGTCGACCG GCGCGTCTAC
TACTACCGCG TCTACGCGCT GACCCGGCAT GCCTATCTCG AGACGAAGGA CGGCAAGCGC
CACCCGATCC TGCCCGGGAT GGTGGCGACC ACGGAAATCC GCACCGGGCG CCGGACCGTG
CTCGATTACC TGATCAAGCC GCTGAACCGC GCGGCGGAAG CGCTGCGGGA GCGGTAA
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| Protein sequence | MWAAFAGLDE VAIGEGKVTP ASKGQVIQSL EGGILSELAA REGDVVEAGQ KLATLDPVQA
RSSMEEALER ISALQARAAR LRAEMDDLPE VTFPPELARE KAVTDRERQL FAANRRAFRE
NVANLREQLR LAEDELKIAM PLLRTGATNE VEILRLKQRA AEFATKLAAT QSEYYVALKA
DYASTMADLG PLLKVREGRA DQLRRTVITS PARGIVKDIR VSTIGGVVGA GGVLMEIVPL
DDQLLIEARL SPRDIAFIHP GQEATVKITA FESSIYGSLP ARVERISPDT IEDQVDRRVY
YYRVYALTRH AYLETKDGKR HPILPGMVAT TEIRTGRRTV LDYLIKPLNR AAEALRER
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