| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05062 |
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| Symbol | RSp1172 |
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| ID | 1223484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1476136 |
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| End bp | 1477716 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637241037 |
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| Product | hypothetical protein |
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| Protein accession | NP_522733 |
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| Protein GI | 17549393 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance
[COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.79349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.109435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTGGC TTGCTGACCC GTCCATCTGG ATCGGACTCG TGACGCTGGT CGTGCTCGAG
ATCGTTCTCG GCATCGACAA CCTCGTCTTC ATCGCCATCC TCGTCAACAA ACTGCCGCCC
GCGCTGAGGG ACCGCGCACG CATGATCGGC CTGGGGCTGG CCCTGGTGAT GCGCATGGTG
CTGCTGTCGA TGATGTCGTG GCTCATCACG CTGACCAAGC CGCTGCTGAC GCTGGGGCCG
GTCGCGCTGT CGGGCCGGTC GATCATCCTG CTGCTGGGCG GCTTCTTCCT GCTGTTCAAG
GCGACCTCCG AGCTGCATGA GCGGCTCGAC GGCCAGCCCC AGGACGACAG CCATGGCGCG
GGGCAGGGCA AGTTCTGGAA CGTGATCGCG CAGGTGGTGG TCCTGGATGC GGTGTTCTCG
CTCGATTCGG TCATCACCGC GGTGGGCATG GTCAACGACC TGCCGGTGAT GATGGCGGCG
GTGGCGGTGG CGATGGGCGC GATGCTGTTC GCGTCGCGCC CGCTGACGGA CTTCGTCAAT
GCGCACCGTA CCGTGGTGGT GCTGTGCCTG AGCTTCCTGC TGATGATCGG CTTCAGCCTG
GTCGCCGAAG GGCTGGGCTT CCATATTCCG AAGGGCTATC TGTACGCGGC GATCGGCTTC
TCGATCCTGA TCGAGTTCTT CAACCAGGTC GCGCAGCGCA ACTCCGACCG CTACGAGCGG
CGCCGCCCGC TGCGCGAGCG CACTGCCGAT ACGGTGCTGA GCCTGCTGGG CGAGCGTCGC
GCCGACCACG GCACCGGCGA GGCGGAGGCC GCCGCCTCGC GCGCGCCCGG TCTGCCCACG
CCCGAGACGG TGTTCCGGCC CGAAGAGCGC AGCATGGTCA GCGGCGTGCT GGGCCTGGCC
GAGCGCTCGG TCCGTTCGAT CATGACGCCG CGCCACGATA TCTCCTGGGT CGACCTGGAA
GGCGACATCG CGCACACCCG GCAACTGCTG CTGGCCGTGC CCCACAACCA GTTCCCGGTC
TGCCGCGGCG GGCTGGACGA CCTGGTGGGC GTCGCCCGCG CGAAAGACCT GATGGGCGAC
CTCGACACGC GCGGCGCCAT CGACGTGGAG CGCTCGGTCA AGCCGGCGCT GAAGGTGTCG
GACGGCATCG GCATCCTGCG CCTGATGGAT CAGCTCAAGC GCTCGCGCGG GCGCATGATG
GTGGTGACGG ACCCGCTCAA CGTGGTGCAG GGCGTGGTCA CGCCCATCGA CGTGCTCGAA
GCCATCGCCG GCGAATTCCC GGACGAGGAC GAGCGCCCCG GCGTGGTGGC GCTCCGCGAA
GGCTGCTGGG AAGTGGCCGG CGAGGCCGAT CTGCGCCAGC TGGAAGACAT CCTGCACGTC
GACTGGCTGC TCGACGAGGG CGGCGGTGCC ACCAGCCTGG GCGGCTACCT GTTCCGCCAG
TGGGACCGGC TGCCCGAGGT CAGCGATGCG CTGGTGCGCC ACGACCTGCG CTTCGTGATC
CTGGAAGTCG GCAGCCGCCG CATCATGCGC GTGCGCATCG AGCGAATGGA AGACGTGACG
GCGCCGGAGG CGGAGGCCTG A
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| Protein sequence | MSWLADPSIW IGLVTLVVLE IVLGIDNLVF IAILVNKLPP ALRDRARMIG LGLALVMRMV
LLSMMSWLIT LTKPLLTLGP VALSGRSIIL LLGGFFLLFK ATSELHERLD GQPQDDSHGA
GQGKFWNVIA QVVVLDAVFS LDSVITAVGM VNDLPVMMAA VAVAMGAMLF ASRPLTDFVN
AHRTVVVLCL SFLLMIGFSL VAEGLGFHIP KGYLYAAIGF SILIEFFNQV AQRNSDRYER
RRPLRERTAD TVLSLLGERR ADHGTGEAEA AASRAPGLPT PETVFRPEER SMVSGVLGLA
ERSVRSIMTP RHDISWVDLE GDIAHTRQLL LAVPHNQFPV CRGGLDDLVG VARAKDLMGD
LDTRGAIDVE RSVKPALKVS DGIGILRLMD QLKRSRGRMM VVTDPLNVVQ GVVTPIDVLE
AIAGEFPDED ERPGVVALRE GCWEVAGEAD LRQLEDILHV DWLLDEGGGA TSLGGYLFRQ
WDRLPEVSDA LVRHDLRFVI LEVGSRRIMR VRIERMEDVT APEAEA
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