Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS04709 |
Symbol | RSp0196 |
ID | 1222327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 241085 |
End bp | 242047 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637240055 |
Product | prolyl aminopeptidase protein |
Protein accession | NP_521757 |
Protein GI | 17548417 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.9672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGAGC TGCGCACCCT CTACCCCGCC ATCGAACCGT ATGAGACCGG CCAACTCGAT GTCGGCGATG GGCACAGCGT CTACTACGAG CGCGTCGGCA CGCCCGGCGC CAAGCCGGCG GTGTTCCTGC ACGGCGGGCC GGGCGGCGGC ATCTCGGCGG ACCATCGCCG GCTGTTCGAT CCGGCACGCT ACGACGTGCT GCTGTTCGAC CAGCGCGGCT GCGGCCGCTC CACGCCGCAC GCGGGGCTGG AGGCCAACAC CACCTGGCAC CTGGTGGACG ACATCGAGCG CCTGCGCGCG CTGGCCGGCG TGGCGCGCTG GCTGGTGTTC GGCGGCTCGT GGGGCTCGAC GCTGGCGCTC GCGTATGCGC AGAAGCATCC CGGGCGCGTC AGCGAACTGG TGCTGCGCGG GATCTACACC GTGTCGCAGG CCGAGCTCGA CTGGTACTAC CAATACGGCG TGTCGGAGCT GTTCCCCGAG AAATGGGCGC GCTTCCAGGC GCCCGTCGCG CCAAGCGAGC GCGGCAACAT GGTCGCCGCC TACCGCAAGC TGCTGACCGA CAGCGATCCG CAGAAACAGA TCGAGGCCGC CCGCGCATGG AGCGTGTGGG AAGGCGAGAC CATCACCCTG CTGCCCGATC CGTCCAACAG CGCCAAGCAT GCGGAAGACC ATTTCGCGCT GGCCTTCGCG CGGCTGGAGA ACCACTACTT CACGCACCGC TGCTGGCTGG AGGACGGACA GCTGCTGCGC GATGCGCACC GCCTGGCCGG CATCCCCGGC GTGATCGTGC ACGGCCGGTA CGACATGCCC TGCCCCGCGC GGTACGCCTA TGCGCTGCAC CAGGCATGGC CGGACGCCGC TTTCCACCTG ATCGAGGGCG CCGGGCATGC CTGGACCGAG CCCGGCATCC TGGACCGGCT GATCGCGGCG ACCGACCGGT TCGCGGCATC GCACGGCCGC TGA
|
Protein sequence | MPELRTLYPA IEPYETGQLD VGDGHSVYYE RVGTPGAKPA VFLHGGPGGG ISADHRRLFD PARYDVLLFD QRGCGRSTPH AGLEANTTWH LVDDIERLRA LAGVARWLVF GGSWGSTLAL AYAQKHPGRV SELVLRGIYT VSQAELDWYY QYGVSELFPE KWARFQAPVA PSERGNMVAA YRKLLTDSDP QKQIEAARAW SVWEGETITL LPDPSNSAKH AEDHFALAFA RLENHYFTHR CWLEDGQLLR DAHRLAGIPG VIVHGRYDMP CPARYAYALH QAWPDAAFHL IEGAGHAWTE PGILDRLIAA TDRFAASHGR
|
| |