Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03722 |
Symbol | RSp0244 |
ID | 1222375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 315864 |
End bp | 318089 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637240103 |
Product | outer membrane hemin receptor signal peptide protein |
Protein accession | NP_521805 |
Protein GI | 17548465 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000281288 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0836882 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCCG CCGCGCTGCT GTGCGCGCCG GCGGCGGGTG CCGAACCGTC CCCCCCCGCC TACGCCCCGG TGCTGGCGAC ACGCGCCGAC CTGACGCTGG ACCCGGTCAT CGTCACCGCC ACGCGGTCGC GGACGGCGTT GAGCCGCACG CCGGCCAGCG TCTCGGTGAT CACCGACACC GATCTGGAGG AACAGCAGGC CGACAACATC AAGGAAGCGC TGCGCTACGA ACCGGGCGTG ACCGTGCGCC GCAGCGCGTT CCGGCCGACA TCGGCGGCGT CCAGCGGATC GGCCGGCGGC TTTGGCGGCA ACCAGGGCAT CAACATTCGC GGGCTGGACG GCAACCGCAT CCTGCTGATG GAAGACGGCA TCCGCCTGCC GGCCGCCTTT GCCTATGGGC CGCTCAATGC CGGCCGCGGC GACTACGCCG ACATGGCGCT GCTGCGCAGC ATCGAGATCC TGCGCGGGCC GGCCTCGTCG CTGTACGGCA GCGACGGGCT GACCGGCGCA GTCAATTTCC TCACCAAGGA CCCGCAGGAT CTGCTGGACG TGTTCGGCAA GGCGTCGTAT TTCGGGCTGC GCTCGGGCTA TGACTCGACC GATCGCAGCT TCGGCACCAC GGTTTCCACC GCCCTGGGCG GCGAACGGTT CCAGGGGATG CTGATCGCCG ACGGCCGGCG CGGACACGCT GTCGACAACC AGGGCAGCAA CGGCAGCGCG GGGGCGGCCC GCACCACGCC CAACCCGCAG GACACCGATA ACACCGCGCT GCTCGGCAAG CTGGTGTTCA AGGCCACGGC CCGCGACACC TTGAAGCTGA CCGGCGAATC GGTGCGCCAG CGCATCGACA GCGACGCGCT GTCGGCCGTC ACCCCGACGC TGCGCAGCCT GCGCTCGGCC GACCGGCTGG AGAGCCAGCG TGTCAGCCTC GACTACGACC ATGCCGACGC CGGCAACCGC TGGTTCCAGA ACGCCCATGC CCTGGTCTAC TTCCGCCGCG CCGAGATCGG GCAAGCGCAG GACGAGATCA GCGTCGCCTC GCAGCGCTCG CGCAACAACC ACTACCGCGA CCACACCTTC GGCCTGTCGT CGCAACTGGA AAGCAACTTC CGCACAGGTT CGCTCTCGCA CAAGCTCGTG TACGGCGCGG ACGCCAGCTT CTCGCGCATC GACAGCGACC GCTCGGGCAC CGGGCCGGCG GCGTCCGACA ACTTCGTCAA CAAGGTCTTC CCCGACACCG GATACGCGCT GCTGGGCGCC TTCGTGCAGG ATGAGATCCG CCGCGGCAGC CTGAGCGTCA TTCCGGCCCT GCGCTACGAC ACATACCGGC TGAAGCCGCG CAACCCGGGC GATCCGCTCT ACACCGGCGT GCAGGCGGGC AGCAGCGACG GTGCGCTGTC GCCCAAGCTG GCGCTGATGT ATGCCTTCGC GCCGGCCGCC ACCGCCTACG TGCAATACGC GCGCGGCTTC CGCACGCCGA CACCCGACCA GGTCAACAAC GGCTTCACCA GCACCGCCGG TTCGCGCGTG TACTACCGCA GCATCGGCAA CCCCCGCCTG AAGCCGGAGA CCAGCGACAC GGTGGAAGTG GGCCTGCGCG GCAAGCTCGA TACCACGCGG GGCCGCATCG CATACAGCGT GGCCGCCTTT GCCGGGCGCT ACCGCAACTT CATCGATCAG GTGACGGTCG GCGGCAGCAT CACCAGCCCG ACCAACCCGC TGACCTATCA GTACGTCAAT GTCAGCCGCG CGTTCATCCG CGGCGTGGAG GCGCGCGGCG AATGGCGGCT GCCGGCCGGC GTGAAGCTGC GCGCGGCGGC GGCCTATACG CGCGGCACGG CCGAAGACGC CGGCGGCGCT ACCACGCCGC TCAATAGCAT CAACCCGCTG CAGGCTGTGT TCGGCGTGCG CTACGAGCCC GGCGAGCGCT GGTTCGCGCA GACCGACATG ACCTGGCAGA TGGCCAAGAG CCCGAGCACC ATCCGCCCGC CCGGCACCGG CGCCACGGCC GACTTCGCGA CGCCGTCGTC GCTCGTGGTG GATGTGGCGG GCGGCTACCG GCTGAACAAG CACGCCTCGC TCTACCTGGC CGTGCGCAAC CTGTTGGACC GCAAGGTGTG GAACTGGTCG GACGTGGCGG GCCTGGGCCT GGCCGGCTCG ACCGCCCTCG ACGCCTACAC CGCGCCCGGA CGCACCTTCG CGGCCACCGT GAAGATCGAG TTCTGA
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Protein sequence | MTAAALLCAP AAGAEPSPPA YAPVLATRAD LTLDPVIVTA TRSRTALSRT PASVSVITDT DLEEQQADNI KEALRYEPGV TVRRSAFRPT SAASSGSAGG FGGNQGINIR GLDGNRILLM EDGIRLPAAF AYGPLNAGRG DYADMALLRS IEILRGPASS LYGSDGLTGA VNFLTKDPQD LLDVFGKASY FGLRSGYDST DRSFGTTVST ALGGERFQGM LIADGRRGHA VDNQGSNGSA GAARTTPNPQ DTDNTALLGK LVFKATARDT LKLTGESVRQ RIDSDALSAV TPTLRSLRSA DRLESQRVSL DYDHADAGNR WFQNAHALVY FRRAEIGQAQ DEISVASQRS RNNHYRDHTF GLSSQLESNF RTGSLSHKLV YGADASFSRI DSDRSGTGPA ASDNFVNKVF PDTGYALLGA FVQDEIRRGS LSVIPALRYD TYRLKPRNPG DPLYTGVQAG SSDGALSPKL ALMYAFAPAA TAYVQYARGF RTPTPDQVNN GFTSTAGSRV YYRSIGNPRL KPETSDTVEV GLRGKLDTTR GRIAYSVAAF AGRYRNFIDQ VTVGGSITSP TNPLTYQYVN VSRAFIRGVE ARGEWRLPAG VKLRAAAAYT RGTAEDAGGA TTPLNSINPL QAVFGVRYEP GERWFAQTDM TWQMAKSPST IRPPGTGATA DFATPSSLVV DVAGGYRLNK HASLYLAVRN LLDRKVWNWS DVAGLGLAGS TALDAYTAPG RTFAATVKIE F
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