| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03704 |
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| Symbol | mdoD |
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| ID | 1222393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 337551 |
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| End bp | 339206 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240121 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | NP_521823 |
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| Protein GI | 17548483 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.124419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.995047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATT GTTCCAAATC CGACGTTACG TCCCAGGCAC CCATGGTCAC GCGCCGACAC
CTTCTTGCCT CCGCTTCCCT CTCCGCCACG CTGGCCGCGC TCGGCATCAC GCCCGAGGCG
CTGGCCGCCA GCCGCGTCAA GCTCGGCAAT GCCGCACCGT TCAACTTCGA TGCCCTCATC
GAGCGGGCCC GCGCCATGGC CGGCCAGCCC TACACGCCGC CGGCCACCGC GCCGGCCGAC
ATCCTCGCCA AGATCGACTA CGAAGCCCAC GGCAAGATCA AGTTCGACAC CGCCCACGCC
CTGTTCGCCG ACGGCCCCGG CCAGTTTCCG GTGACGTTCT TCCACCTGGG CACGTTCTTC
CGCGCACCGG TGCGCATGCA CGTGGTGGAC AAGGGCGAAG CGCGCGAGAT CGTCTACGAC
GAGTCGTACT TCGACATGCC CGCCGACAGC CCCGCGCGCA AGCTCCCGCG CAACAGCGGC
TTCGCGGGCT TCCGCTTCCA GGAAAGCCGC CTGGGCGACC AGAAAAAGCT CGACTGGAAG
AAGAACGACT GGGTCGCCTT CCTGGGTGCG TCGTACTTCC GTGCCATCGG CGAGCTGTAT
CAATATGGCC TGTCCGCGCG CGGCATCGCA CTCGACGTGG CGCAGGCCGG CCGCGCGGAA
GAATTCCCCA ACTTCACGCA CGTGTGGTTC GACACGCCGT CCAATGAGCA CGCCGATTCG
GTGACGATCT ACGCGCTGCT CGACGGCCCG GGCATCACCG GCGCATACCG CTTCGTCATG
CACCGCGGCA AGGGCGTGGT GATGGAGATC GACACGGCCC TCTTCCTGCG CCGCGACATC
GACCGCTTCG GCATCGCGCC GGCCTCGTCG ATGTACTGGT TCTCCGAAAC CGCCAAGGGC
ACCGCTACCG ACTGGCGCCC CGAAGTGCAC GACTCCGACG GTCTGGCGAT GTGGACCGGC
AGCGGCGAGC GCATCTGGCG CCCGCTGAAC GATCCGCCGC GCGTCATGAC CTCGGCGTTT
TCCGACAACA ACCCGCGCGG CTTCGGCCTG CTGCAGCGCG ACCGCGATTT CAACAACTAC
ATGGACGGCG TGCACTATGA GCGCCGTCCG AGCCTGTGGG TCGAGCCGCT GGAAGGCTGG
GGCGAAGGCG CCGTGCAGCT GGTGGAGATC CCCACCGACG ATGAGATCCA CGACAACATC
GTCGCCATGT GGGTGCCGAA GGCACCGGCG CGCGCCGGCA GCCACTACCG CCTGCGCTAC
CGCCTGCACT GGCTGGCCGA CGAGCCGTAT CCGACGCCGC TGGCGCGCTG CGTGGCCACG
CGCCTGGGCA ACGGCGGCCA GCCTGGCCAG CCGCGTCCGC GCGGCGTGCG CAAGTTCATG
GTGGAGTTCA AGGGCGGCCC GCTCGAGAAA GTGCCCTTCG GCGTCAAGCC GGAGGCCGTG
CTGACCAGCT CGCGCGGCAC GTTCTCGTAC GTGTTCACCG AGGCCGTGCC CAACGGCGTG
CCCGGCCACT GGCGCGCGCA GTTCGACCTG ACGGTCGACG GCAAGGAGCC GGTGGACATG
CGCCTGTTCC TGCGCCTGGA CGGCAAACCG CTGTCCGAGA CGTGGCTGTA CCAGTACCAC
CCGTTCCAGT CGCCGGTGGG GCCGGTGGCG AGCTGA
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| Protein sequence | MSDCSKSDVT SQAPMVTRRH LLASASLSAT LAALGITPEA LAASRVKLGN AAPFNFDALI
ERARAMAGQP YTPPATAPAD ILAKIDYEAH GKIKFDTAHA LFADGPGQFP VTFFHLGTFF
RAPVRMHVVD KGEAREIVYD ESYFDMPADS PARKLPRNSG FAGFRFQESR LGDQKKLDWK
KNDWVAFLGA SYFRAIGELY QYGLSARGIA LDVAQAGRAE EFPNFTHVWF DTPSNEHADS
VTIYALLDGP GITGAYRFVM HRGKGVVMEI DTALFLRRDI DRFGIAPASS MYWFSETAKG
TATDWRPEVH DSDGLAMWTG SGERIWRPLN DPPRVMTSAF SDNNPRGFGL LQRDRDFNNY
MDGVHYERRP SLWVEPLEGW GEGAVQLVEI PTDDEIHDNI VAMWVPKAPA RAGSHYRLRY
RLHWLADEPY PTPLARCVAT RLGNGGQPGQ PRPRGVRKFM VEFKGGPLEK VPFGVKPEAV
LTSSRGTFSY VFTEAVPNGV PGHWRAQFDL TVDGKEPVDM RLFLRLDGKP LSETWLYQYH
PFQSPVGPVA S
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