| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03184 |
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| Symbol | RSp1240 |
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| ID | 1223552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1577674 |
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| End bp | 1578846 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637241105 |
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| Product | putative transglycosylase protein |
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| Protein accession | NP_522801 |
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| Protein GI | 17549461 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0378496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTTCGG GCGCCTCGGC AACCGGCGCC AGCCTTTCGG GGACGGACGC AACGTTCGAT
GCATGGGTCA CCGGCTTTCG CCAGAAGGCC ATCGATGCGG GCATCCCTGC CGGCACGTTC
GACTCGGCAT TCAAGCAAGT GACGCCCGAC CCCGAGGTCG TGGAGCTCGA TCGGCAGCAG
CCGGAATTCA CCACCGCGAT CTGGGACTAT CTCGACAAAC GCATCACCGC CGAGCGCATC
CAGCAGGGCC AATCCTTGCT GGGCATGCAC GACGCCATGT TCCAGCGGCT GGAGCGCGAC
TACGGTGTCG ACAGGCACAT ACTGACCGCG ATCTGGGCCA TCGAGAGCCA GTACGGAAGC
GAGATCGGCA AGCGCTACAT CATCCGCTCG CTGGCAACCC TGGCGAACGA CGGGCGTCGC
AAGACGTATG CCGAAAACCA GTTGCTGGCC TCCCTGCAGA TTCTTCAGAA GGATCGGATC
CCCCGCGAAC AGCTGGTGGG CTCCTGGGCC GGCGCCATGG GGCAGACGCA GTTCATTCCG
ACAACCTACC TGGCCTACGC GGTCGATGGC GACGGCGACC AGAAACGCGA CATCTGGAAC
TCCTCCGCCG ATGCGCTGGC CTCGGCCGCG AACTATCTCA AGGAGGCCGG CTGGCAGCGC
GGCGGCATCT GGGGACGTGA GGTCAAGGTG CCCGAGACCT TCGATTACGC CCTGGCGGAC
ATGTCGGTCA AGAAGTCCGT GGCCGAATGG CAGTGGCTGG GCGTGGTCGG CGCCTGCGAT
CCGCTTCCGC CGCAGATCGC CAGCCTCCAG GCCTCCATCC TCATGCCGGC CGGCTACCGT
GGCCCCAAGT TCCTCGTGCT GGACGGCTAC CGCGCCATCC GGCGCTACAA CCCCTCCACC
GCCTACGCCC TGGCCGTGGC GCTGCTGGCC GACAGCTATG CCGGCAAGGG CAAGCTGGTC
CAGGCCTGGC CGACCGATGA TCCGGCCCTG AACAACGCCA CCGACATCAA GCGGCTCCAG
CAACGGCTGG CCGACAAGGG ATACGACCCG GGCACGATCG ACGGCCTCAT CGGCGACCGC
ACCCAGACCG CCATCCGCGC CTACCAGAAG GATCAGCATC TGCCGCAGGA TGGTTATGCC
AGCCGGTCGC TGCTGGCTCG GTTGGAGAAG TAA
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| Protein sequence | MASGASATGA SLSGTDATFD AWVTGFRQKA IDAGIPAGTF DSAFKQVTPD PEVVELDRQQ
PEFTTAIWDY LDKRITAERI QQGQSLLGMH DAMFQRLERD YGVDRHILTA IWAIESQYGS
EIGKRYIIRS LATLANDGRR KTYAENQLLA SLQILQKDRI PREQLVGSWA GAMGQTQFIP
TTYLAYAVDG DGDQKRDIWN SSADALASAA NYLKEAGWQR GGIWGREVKV PETFDYALAD
MSVKKSVAEW QWLGVVGACD PLPPQIASLQ ASILMPAGYR GPKFLVLDGY RAIRRYNPST
AYALAVALLA DSYAGKGKLV QAWPTDDPAL NNATDIKRLQ QRLADKGYDP GTIDGLIGDR
TQTAIRAYQK DQHLPQDGYA SRSLLARLEK
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