Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03052 |
Symbol | RSp1491 |
ID | 1223803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1869992 |
End bp | 1871833 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637241354 |
Product | putative transferase protein |
Protein accession | NP_523050 |
Protein GI | 17549710 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2192] Predicted carbamoyl transferase, NodU family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0167883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATTCCT ACATTCTCGG CCTCTCCTGT GGCTACCATG ACAGCGCCGC CAGCTTGCTG CACAACGGCA GCATCATTGC CGCGGCGCAG GAGGAGCGGT TCACCCGTGT CAAACAGGAT GCGCGCTTTC CGCGAAACGC CATCCAATAT TGCCTGCGCG AGGCCGGCAT TGGCCTGGGC GCCGTGGACG CCGTCTACTA CTACGAGAAC CCCGACAAGA AATTCGACCG GATCGCACAG ACCTACCTGA ACTTCGGCTT GCACGGCCTG AAGTCTTTCG TGCAGGAAAT GCCGGACTGG CTGTTCAGCA AGCGTTTTGT GAAGCGCACG CTGCGCAGCG AACTGCAGCC GTTGCTGCCG GCAGGCGCGT CCATGCCGCG GCTGGCATAC ATCGACCACC ATGAGTCGCA TGCGGCGGCG GCCTTCTTCC CAAGTCCGTT CCAGCAGGCT GCCGTGCTGT GCGTGGACGG CGTCGGCGAA TGGGCGACCA CCTCGGCGTG GCTGGGTGAT GGTCACCGGA TGACGCCGTT GTGGGAGATC CGGTTTCCCC ATTCGCTTGG CCTTCTGTAT TCCGCCATCA CGTACTACTG CGGCTTCAAG GTCGACTCCG GCGAATACAA GCTGATGGGC CTGGCTCCGT ACGGCCGCCC GGTGTATGCG CAGCAGATCC GCGATCACCT TATCGACGTC AAGGATGACG GCAGCTTCTG GCTGAACATG GCGTACTTCG ACTATGCGGT CGGCGACTGC ATGGTCAACG AGAAATTCTG CCGGTTGTTC GGCGGTCCGC GGCGTGAGCC AGAGAGCCTG ATCACGCGGC GCGAATTCGA TCTGGCCGCC TCGATCCAGG TGGTGCTGGA GGAGACCCTG CTGCGCCTGG CGCGCACGCT GCGCCGTCAG AGCGGCATGC GCAACCTGTG CATGGCGGGA GGGGTGGCAC TGAACTGCGT GGCCAACGGC AAGCTGCTGG CCAGCGGCAT TTTTGACCAG GTCTGGGTGC AGCCAGCGTC AGGCGATGCC GGCGGGGCGC TCGGTGCGGC CTTGGCCGGA CATCATCTGC GCGAGGGCGC GCCGCGCCTG CCGCAAAGCG GCGACCGCAT GCACGCCACG CTGCTGGGCT CCAGCTATGC CGATGCGGAG ATCGCTTCGG CGCTGCGCAC CCTCGGCGCG GTATACACGC GGCTCGACGA CCAGACGCTG TGCGGGGATG TCGCCCGGCT GCTGGCCGAT GGCCATGTTG TCGGCTGGTT CCAAGGGCGC ATGGAGTTCG GCCCGCGCGC GCTCGGCTCG CGTTCGATTC TCGGCGATGC ACGCAATCGC GAGATGCAGA GCGTGATGAA CCTGAAGATC AAGAACCGCG AATCGTTCCG CCCGTTCGCG CCCGTGGTGC TCGAGGAGCA CGTCGGCGAG TGGTTCGAAC TGGACCGCAA CAGTCCGTAC ATGCTGTTCG TGGTGGGTGT CAGCCCCGAC AAGCGGCTGG AATTGAACAC GCGGGATCAG GCCCTGGAGG GCATCGAGCT GCTCAAATGC ATCCGCTCCG AGGTGCCTGC TGCCACGCAC GTCGATTATT CCGCGCGGGT GCAGACCGTG GGCAAGGACG CCAATCCGCG CCTGCGCGAA CTGCTGCAGG CCTTCCATGG GCTGACCGGA TGCCCGGTGC TGGTCAACAC CTCGTTCAAC GTGCGCGGCG AGCCGATCGT GGAGAGCCCG GCCAATGCCT ATCTGTGCTT CATGCGCACG CAGATGGACT ACCTCGTCGT CGGCAACTAC CTGATGAAGA AGTCCGACCA GCCGGCCCTG GTCGAGCACC ACGACTGGCG CGAGGAATTC GCGCTGGACT GA
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Protein sequence | MNSYILGLSC GYHDSAASLL HNGSIIAAAQ EERFTRVKQD ARFPRNAIQY CLREAGIGLG AVDAVYYYEN PDKKFDRIAQ TYLNFGLHGL KSFVQEMPDW LFSKRFVKRT LRSELQPLLP AGASMPRLAY IDHHESHAAA AFFPSPFQQA AVLCVDGVGE WATTSAWLGD GHRMTPLWEI RFPHSLGLLY SAITYYCGFK VDSGEYKLMG LAPYGRPVYA QQIRDHLIDV KDDGSFWLNM AYFDYAVGDC MVNEKFCRLF GGPRREPESL ITRREFDLAA SIQVVLEETL LRLARTLRRQ SGMRNLCMAG GVALNCVANG KLLASGIFDQ VWVQPASGDA GGALGAALAG HHLREGAPRL PQSGDRMHAT LLGSSYADAE IASALRTLGA VYTRLDDQTL CGDVARLLAD GHVVGWFQGR MEFGPRALGS RSILGDARNR EMQSVMNLKI KNRESFRPFA PVVLEEHVGE WFELDRNSPY MLFVVGVSPD KRLELNTRDQ ALEGIELLKC IRSEVPAATH VDYSARVQTV GKDANPRLRE LLQAFHGLTG CPVLVNTSFN VRGEPIVESP ANAYLCFMRT QMDYLVVGNY LMKKSDQPAL VEHHDWREEF ALD
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