Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03042 |
Symbol | RSp1499 |
ID | 1223811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1881268 |
End bp | 1881993 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637241362 |
Product | putative pili assembly chaperone transmembrane protein |
Protein accession | NP_523058 |
Protein GI | 17549718 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.168941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.259112 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTGCGC ACAGCGCCGG CGCCGCGATG CGGTGGCGGC GCGCGTGCGC CTGGCTGGTG CTGCTGATGG GCACGTTCGC GCCGCTCGCG GCGGGCGCAG CGGCGCTGCA GATTTCACCG ATCCGGCTCG ACCTTCTCCC GGGGCAAAGC GCCGGCAGCC TCACGCTGCG CAATCGCGGC ACGCAGCCGC TCAACGCGCA GGTGCGCGTG TTCCGCTGGA CGCAGGATGC CGAAGGCGAC CGTCTGGAGC CGGCTCCAGC GCTGGTCGCC AGCCCGCCCA TCGTGCAGAT TTCGGGCGAG GGCGAGCAGC TCGTGCGCGT GGTCCTCACG CAGCCGGCCG CAGGCAACGA TGAGCAGACC TATCGGCTCC TCATCGACGA ACTGCCCGAG CGCCGCCCGC AGGCGCAGAC AGGCGTGACG ATGCAGCTGC GCTACTCGGT GCCGGTGTTC GTCAACGCCA GCACCGGGGC ACCGCCCCGG CTCAGTGCCG CGCTGCGGCG CGATGGCGGG CGGACCCTGC TGGTGGTTCG CAATCCGGAA GCGCGTCACG CGCAGCTCGC CGACGTGTCG ATCGAATGGA GCGATGGGAC GCGCAGCCCG CTGACCGCGG GCCTGCTCGG CTATGCCCTG GGCGGCGCGA CGCGCGCCTG GCCGGTGGCC GACGCGCGCG CGGCCCGCGC CCGTGCCACG GCGGTTGCGG GCCCAGGTCA ACGGTGTCGC GGTTGA
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Protein sequence | MLAHSAGAAM RWRRACAWLV LLMGTFAPLA AGAAALQISP IRLDLLPGQS AGSLTLRNRG TQPLNAQVRV FRWTQDAEGD RLEPAPALVA SPPIVQISGE GEQLVRVVLT QPAAGNDEQT YRLLIDELPE RRPQAQTGVT MQLRYSVPVF VNASTGAPPR LSAALRRDGG RTLLVVRNPE ARHAQLADVS IEWSDGTRSP LTAGLLGYAL GGATRAWPVA DARAARARAT AVAGPGQRCR G
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