Gene RS02970 details

Gene Information

• Locus tag: RS02970
• Symbol: RSp0150
• ID: 1222553
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: -
• Start bp: 171388
• End bp: 171822
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637240009
• Product: general secretion pathway GSPG-like transmembrane protein
• Protein accession: NP_521711
• Protein GI: 17548371
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0455058
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGTTCG CAGCCTTGCG CACGCCGCGC GTTCACGCCA CGCGCGGCTT TACCTTGCTT 
GAATTGCTTG TGGTGGTGGC CATCATCGGC CTGCTCGCGG CCTATGTCGG GCCGCGGTAT 
TTCGCACAGA TCGGCAAATC GGAAGTCACC ACCACCAAGG CGCAGATCGA GGCCTTCAGC 
AAAGCGCTGG ACACGTATCG ACTGGATACC GGCCACTTCC CCACCAATGA ACAGGGACTC 
GGCGCGCTGT TGTCGCGGCC ATCGGGAGAA AGCCGATGGA ATGGTCCGTA TCTGCAAAAG 
GCGATTCCGC TCGACCCGTG GGGCAAGCCG TACGCCTACC GCACGCCGGC GGAGAACAAG 
GACTACGAGA TCCGCTCCTT CGGTAAGGAC GGGCTGCCGG GCGGCAGCGG CGACAACGCC 
GACATCACCA ACTGA 

 

Protein sequence

MAFAALRTPR VHATRGFTLL ELLVVVAIIG LLAAYVGPRY FAQIGKSEVT TTKAQIEAFS 
KALDTYRLDT GHFPTNEQGL GALLSRPSGE SRWNGPYLQK AIPLDPWGKP YAYRTPAENK 
DYEIRSFGKD GLPGGSGDNA DITN