| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02396 |
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| Symbol | RSp1059 |
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| ID | 1223371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1341353 |
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| End bp | 1342138 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637240924 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | NP_522620 |
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| Protein GI | 17549280 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.613287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGACC TGAAAGGAAA AGTCGCCGTC GTCACCGGTG CCGCCAGCGG CATCGGCAAG
CAGATCGCCC TCACGCTTGC CCGGGCCGGC GCGGCCATCG GCATCGTCGA CCTGAACGAA
GATGGCGCCC AGGCCGCCGC CAAGGAGATC ACCGACGCCG GCGGCAAGGC CATCGGCCTG
CGCATGGACG TCACCGACGA ACAGGCGGTC GACATCGGCA TCGACCGCGT GGCGGCCGAA
CTGGGCTCGG TCGACATCCT GGTCTCCAAC GCCGGCGTCC AGATCGTCAA CCCGATCGAG
AGCTATGCCT TTGCCGACTG GAAGAAGATG CAGGCCATCC ACGTCGACGG CGCCTTCCTG
ACCACGCGCG CGGCGCTGCG CCACATGTAC AAGGACAAGC GCGGCGGCGT GGTGATCTAC
ATGGGCTCGG TGCACTCGCA CGAGGGCTCG CCGCTGAAGT CGGCCTACGT GGCGGCCAAG
CACGCGCTGC TGGGGCTGTC CAAGGTGCTG GCCAAGGAGG GCGCGGCGCA TAACGTGCGC
TCGCACGTGG TATGCCCGGG GTTCGTGCGC ACGCCGCTGG TCGACAAGCA GATTCCCGAG
CAGGCCAAGG AGCTCGGCAT CAGCGAGGAA GACGTGGTGA AGAAGGTGAT GCTGGGCGGC
ACCGTCGACG GCGTGTTCAC GACGGTGGAA GATGTGGCCG AGACCGTGCG CTTCCTGGCG
AGCTTCCCCA GCGCGGCGCT GACCGGCCAA TCGTTCGTGG TCAGCCACGG CTGGTTCATG
CAGTAA
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| Protein sequence | MSDLKGKVAV VTGAASGIGK QIALTLARAG AAIGIVDLNE DGAQAAAKEI TDAGGKAIGL
RMDVTDEQAV DIGIDRVAAE LGSVDILVSN AGVQIVNPIE SYAFADWKKM QAIHVDGAFL
TTRAALRHMY KDKRGGVVIY MGSVHSHEGS PLKSAYVAAK HALLGLSKVL AKEGAAHNVR
SHVVCPGFVR TPLVDKQIPE QAKELGISEE DVVKKVMLGG TVDGVFTTVE DVAETVRFLA
SFPSAALTGQ SFVVSHGWFM Q
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