Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02392 |
Symbol | RSp1055 |
ID | 1223367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1335600 |
End bp | 1337099 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637240920 |
Product | transmembrane aldehyde dehydrogenase oxidoreductase protein |
Protein accession | NP_522616 |
Protein GI | 17549276 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.697821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGATG CTGTGGTCAG CCACTACATC GCCGGACAGC GCCATGCCGG CACCGCCACG CGCAGCGCCG ACGTGTTCAA CCCCGCCACC GGTGCCGTAT CGGCACAGGT GCTGCTGGGC GGCAAGGCCG AGGTGGATGC CGCCGTGGCC GCCGCCCGCG CCGCCGCGCC GGCCTGGGCC GAGACCTCGC CGCTCAAGCG CGCGCGCATC CTGTTCAAGT TCAAGGAGCT GCTCGACCAG CACCATGACG CGCTCGCGGC CGCCATCACG CGCGAGCACG GCAAGGTGTT CTCCGATGCC AAGGGCGAAG TCACGCGCGG CATCGAGGTG GTGGAGTTCG CCTGCGGCAT CCCGAACCTG CTCAAGACCG AATTTACCGA CAACATCGGC GGCGGCATCG ACAACTGGAA CCTGCGCCAG CCGCTGAGCG TGGTGGCCGG CATCACGCCG TTCAACTTCC CGGTGATGGT GCCGATGTGG ATGTTCCCGG TCGCGCTGGC GTGCGGCAAC ACCTTCGTGC TCAAGCCGAG CGAGCGCGAT CCGAGCCCCA GCCTGATGAT CGCCGACCTG CTCAAGCAGG CCGGCCTGCC CGACGGCGTG TTCAATGTCG TGCAGGGCAG CAAGGAGGCG GTGGACGCGC TGCTGGCCCA TCCGGACGTG CAGGCCGTGT CGTTCGTCGG CAGCACGCCG ATCGCCGAAT ACATCTATGC GGAAGGCACC CGGCGCGGCA AGCGCGTGCA GGCCCTGGGC GGCGCCAAGA ACCACCTGGT GGTGATGCCC GATGCCGATC TCGACCAGGC GGTGGACGCG CTGATCGGCG CAGCGTACGG CTCGGCCGGC GAGCGCTGCA TGGCGATCTC GGTGGCGGTG GCGGTGGGCG GCGTGGCCGA CCGGCTGGTG CCGCGCCTGG CCGAGCGCGC GCGGGCGCTC CAGATCGGCA ACGGCATGGA GCCGCGCAGC GAAATGGGGC CGCTGGTGAC CGGCGCGCAC AAGGTCAAGG TCGAAGGCTA CATCGCCAAG GGTGTGGAGG AGGGCGCGCA GCTCGTGGTG GATGGCCGTG GCCATACCGT CGAAGGCCAC GCCGAAGGCT TCTTCACCGG CGGCACGCTG TTCGACCACG TCACGCCCGA CATGACGATC TACAAGGAAG AAATCTTCGG CCCGGTGCTG TCGGTGGTGC GCGTGCACGA CTTTGCCGAA GCGGTGGACC TGATCAACGC GCACGAATAC GGCAACGGCG TGTCGTGCTA CACCAGCGAC GGCGGCATCG CGCGGGCGTT CGCGCGGCAG ATCCAGATCG GCATGGTCGG CATCAACGTG CCGATCCCGG TGCCGATGGC GTGGCACAGC TTCGGCGGCT GGAAGCGCTC GCTGTTCGGC GATCACCACG CCTATGGCGA AGAGGGCGTG CGCTTCTACA CGCGCTACAA GAGCGTGATG CAGCGCTGGC CGGATTCGAT CGCCAAGGGT GCGGAATTCG TCATGCCGAC GGCGAAGTGA
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Protein sequence | MADAVVSHYI AGQRHAGTAT RSADVFNPAT GAVSAQVLLG GKAEVDAAVA AARAAAPAWA ETSPLKRARI LFKFKELLDQ HHDALAAAIT REHGKVFSDA KGEVTRGIEV VEFACGIPNL LKTEFTDNIG GGIDNWNLRQ PLSVVAGITP FNFPVMVPMW MFPVALACGN TFVLKPSERD PSPSLMIADL LKQAGLPDGV FNVVQGSKEA VDALLAHPDV QAVSFVGSTP IAEYIYAEGT RRGKRVQALG GAKNHLVVMP DADLDQAVDA LIGAAYGSAG ERCMAISVAV AVGGVADRLV PRLAERARAL QIGNGMEPRS EMGPLVTGAH KVKVEGYIAK GVEEGAQLVV DGRGHTVEGH AEGFFTGGTL FDHVTPDMTI YKEEIFGPVL SVVRVHDFAE AVDLINAHEY GNGVSCYTSD GGIARAFARQ IQIGMVGINV PIPVPMAWHS FGGWKRSLFG DHHAYGEEGV RFYTRYKSVM QRWPDSIAKG AEFVMPTAK
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