| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02379 |
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| Symbol | RSp1042 |
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| ID | 1223354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1320253 |
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| End bp | 1320936 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240907 |
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| Product | two-component response regulator transcription regulator protein |
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| Protein accession | NP_522603 |
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| Protein GI | 17549263 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.261012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACATCC TCCTAATAGA AGACGATCAG AAAGCGGCCC GCCTGCTGGC CAGGGGCTTG
CAGGAGGAAG GCTTCGAGGT GGCGGTCGCG CATTCCGCGG AAGAGGCCGA TGCCTCGCTT
CTGGTGGCAT GCCAGCTGAT CATCCTGGAT TGGATGCTCC CGGGCAAGGA CGGCATCGCC
CTGTGCCGCG AGCTGCGCGA GCGCGATCTC CAGACCCCCG TCCTCATGCT GACCGCCCGC
GACGCGACCG CCGATCGCAT CGCCGGCCTG GATACCGGCG CCGACGACTA CCTGACCAAG
CCCTTCGTCT TCGATGAGTT GCTCGCCCGC GTCCGCGCGC TGTTGCGGCG GGCCCGGCTG
GCGCCCGCCG CGCCGCGGGT CATCGGCGAC CTCGTGCTCG ATCCGAACGC GCGGGCGGTG
ACGCGCGGCG GCCAGGCGCT CGATGTCACG CCCAAGGAAT ACGCGATCCT CGAATATCTG
ATGCGGCATG CCGGGCAGAT CGTCAGCCGC CTGCAGCTGG CCGAGCACGT CTGGCGCGCC
GACCTGATCG CGATCGACAA CCTCATCGAC GTGCACATGA AGAACCTGCG CCGCAAGGTC
GATCCGCCCG GCCAGCCGGC CCTCATCCAT ACGGTGCGGG GCCAGGGCTT TCGCCTCGCG
GCGCCGGAGC GCCGGCATGC TTAG
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| Protein sequence | MHILLIEDDQ KAARLLARGL QEEGFEVAVA HSAEEADASL LVACQLIILD WMLPGKDGIA
LCRELRERDL QTPVLMLTAR DATADRIAGL DTGADDYLTK PFVFDELLAR VRALLRRARL
APAAPRVIGD LVLDPNARAV TRGGQALDVT PKEYAILEYL MRHAGQIVSR LQLAEHVWRA
DLIAIDNLID VHMKNLRRKV DPPGQPALIH TVRGQGFRLA APERRHA
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