Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02227 |
Symbol | RSp1668 |
ID | 1223980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 2080680 |
End bp | 2081834 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637241531 |
Product | sigma-54 interacting transcription regulator protein |
Protein accession | NP_523227 |
Protein GI | 17549887 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTGA GCGAAGCCTT CGCAGACGAT CGCGCAGTCA CCACCGGGCG CCTGCCCTGC CCTCCCAGGC TGGCAGACCG CGCCGATACC GACGCCATCG ACGTGTTCGG CGATGCCGCG CACCTGACCG CGTTCGCCAA TCCCCCCGCT GTCTCCGTAT CCGCGCCTGT TGTCGCCGAC CCCGACTTCG GCCACCTGTA CGGCCATTCA GCCGTCATGC GGACGCTGTA TGGCCAGATC GGCAAGGTGT CCGGCACGCT GGCAACCGTG CTGATCATCG GAGAATCGGG CACCGGCAAG GAACTGATCG CGCGCACCGT GCACGACATG AGCCCGCGTG CTGACCAGGC CTTCATCGCC GTCAACTGCG GCGCGATCTC GCCCAACCTG ATCGAATCGG AGCTGTTCGG CCACGAGAAG GGCAGCTTCA CCGGCGCGCT CCAGCGCCAC ACCGGCTATT TCGAGCAGGC CTGCAACGGC ACGATCTTCC TCGACGAGAT CACCGAGATG CCGGTGGAGA TGCAGGTCAA GCTGCTGCGC GTGCTGGAGA CCGGCACGTT CATGCGCGTG GGCGGCACGG AGCCGATCGA GACCCGCGCG CGCATCATCG CCGCGACCAA CCGCAATCTG CCGGAGGCCG TGTCCGACGG CACCTTCCGC GAAGACCTGA TGTATCGGCT GGCGGTGGTG CCGCTGCACG TGCCGCCGCT GCGCGACCGC GACGAAGACA TCGAAGCGTT GGCCCACCAT TTCCTGGCGC AATTCAACGC CGCGCACCAG ACCGACAAGA CCTTCGCGCG CTCCGCCCTG TCGGCGCTGC GCCAGCACCC TTGGCCGGGC AACGTGCGCG AGCTGCGCAA CGCCGTGCAG CGCGGCTACA TCCTGGGCGA AAAGACGGTG GAGCTCGCCA TGCCGCTGGT CTCGCTGCGC AGCCCGTCGC GCCCGTCGGT GAAGGAAGGC GTGCTCAATG TCTCGGTGGG CGTCACGCTG GCCGAAGCCC AGCGCGTCAT GATCCTCGCC ACGCTGGAGC ATTTTCGGGG CGACAAGCGC CAGGCCGCCA AGACCCTCGG CGTCAGCCTC AAGACGCTCT ACAACCGGCT CGACCTGTAT CACAGCCAAA GCCAAGGCAC CGAGGCCGCC GGGCTGCCCG CGTAG
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Protein sequence | MSLSEAFADD RAVTTGRLPC PPRLADRADT DAIDVFGDAA HLTAFANPPA VSVSAPVVAD PDFGHLYGHS AVMRTLYGQI GKVSGTLATV LIIGESGTGK ELIARTVHDM SPRADQAFIA VNCGAISPNL IESELFGHEK GSFTGALQRH TGYFEQACNG TIFLDEITEM PVEMQVKLLR VLETGTFMRV GGTEPIETRA RIIAATNRNL PEAVSDGTFR EDLMYRLAVV PLHVPPLRDR DEDIEALAHH FLAQFNAAHQ TDKTFARSAL SALRQHPWPG NVRELRNAVQ RGYILGEKTV ELAMPLVSLR SPSRPSVKEG VLNVSVGVTL AEAQRVMILA TLEHFRGDKR QAAKTLGVSL KTLYNRLDLY HSQSQGTEAA GLPA
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