Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02209 |
Symbol | RSp1650 |
ID | 1223962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 2067299 |
End bp | 2068129 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637241513 |
Product | putative transmembrane protein |
Protein accession | NP_523209 |
Protein GI | 17549869 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.991816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGATCT GTGACGACGT CCGCGCCCTG CTGACCGCCC GCGCCGACGG CGAACTGAGC GCGGCCGACA GCCTGCGCAC CGAATCGCAC CTGGCGACGT GTGCCGCGTG CGCCGTCGCG GCGGCCCGTC ACGATGCGAT GGTGCGCGCG CTGCGGCAAG GGCTGCGTGC GCCCGCGCTC TATGCGGCGG CGCCGCAGGG CTTGGCCGGG CGCATCCTGC AGGCCGTGCA GGCGGAAGCG CCGCAGCCCG CCATGCCGGC GTCCCGCGGG CATGCGCCAC CGCGCTCCGC CTGGCGCCGA GGGCTGGCCT GGCTGATGAC GCCCGGCGTG CCGGGCCGGA CGTTCGGCCT GGGGCTGGGG GCCGGCTCGC TGGCGGTGCT GGCGCTGGGG ATCGGCGTGC TGCTGGGCCG GCCGGATGCG CAGGCTCTGG TGGCGCGCGA CATCACGGCC AGCCACGTGC GCGCCTTGCT GGGCGCGCGC GAGATCGATG TGCAGTCGTC AGACCGGCAT ACCGTGAAGC CGTGGTTCAA CGGCCGCATC GACTACGCGC CGCCGGTGGG CGATCTGGCC GCGCGCGGCT TCCCGCTCAT CGGCGGGCGG CTGGACTACA TCGACGGCCG GCCGGTCGCG GTGCTGGTCT ATCGTGCGGG GCAGCATCCG GTCGATCTCT ATGTCCGCCC GGAGGCGGGC GGCGATGCCG GCGAGGCGTT GCGGACGGAA CGCGGCTACC AACTGTTGCA CTGGCGAACC GCGGGCATGG GCTATTGGGT CATCACCGAT GCGTCGGCCG ACGTGGTGCG AACCTTCGCC ACGGCGGTGC GCGGGATGTG A
|
Protein sequence | MMICDDVRAL LTARADGELS AADSLRTESH LATCAACAVA AARHDAMVRA LRQGLRAPAL YAAAPQGLAG RILQAVQAEA PQPAMPASRG HAPPRSAWRR GLAWLMTPGV PGRTFGLGLG AGSLAVLALG IGVLLGRPDA QALVARDITA SHVRALLGAR EIDVQSSDRH TVKPWFNGRI DYAPPVGDLA ARGFPLIGGR LDYIDGRPVA VLVYRAGQHP VDLYVRPEAG GDAGEALRTE RGYQLLHWRT AGMGYWVITD ASADVVRTFA TAVRGM
|
| |