Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02109 |
Symbol | RSp1553 |
ID | 1223865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1953303 |
End bp | 1954619 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637241416 |
Product | transmembrane two-component sensor kinase transcription regulator protein |
Protein accession | NP_523112 |
Protein GI | 17549772 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.620741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCCA TTCGCAAGAC GCTGTTGTGG TGGCTCTCGG GCGGACTGCT CGCGGGCATC GTTGCCGCCA CGCTCCTCAT CTACGCGCAG GCCCGCCAGG AGGCCAACGC GCTGTTCGAC TACCAGATGC AGCAGGTGGC CGCCGCGCTG CCCAGCCAGT GGATCGACCC GCCGCCGCCC GCGCTGGCCG GCATCGCCCA CGACGACGAT GTGGTGATCC GCATCTGGGA CGACACCGGC CGCAGCCTCT ACCTGTCGCA CGCGCGGCCC GACCTGCCCA CGCAGGCCGA ACTGGGCTTC TCCGATGTCG TTACGCCGGA GGGGACGTGG CGCGTCTACA GCGTCGCCTT CGGGCCGGCG GTGGTGCAGA TCGCACAGCC CTACAGCGCG CGGCACGAGG TGGCGGCCCG CATGGCGCTG CGCACCGTCG CGCCGCTGCT GATCCTGCTG CCGCTGCTGG CTTGGCTGGT GTGGCTGGCG GTGGGGCGCG GCCTGTCGCC GCTGGGCACG GTGGCCCGCC AGGTGCAGAC ACGCGATGCG GCCGCGCTGT CGCCGCTGCC CACGCACGGG CTGCCCGCCG AGATCCGTCC GCTGACCACC GCGCTCAATG ACCTGCTCGC CCGCCTGGGC GGTGCGCTGG CGCACCAGCG TGCGTTCGTC GCCGACGCCG CCCACGCGCT GCGCACGCCA CTGGCCGCGC TCAAGCTGCA GCTGCAGGTG GCCGACCGCG CGCAGAGCGA GGACGAGCGC CGCGCCGCGC ATGCCGATCT GCATCGCGGC GTGGAGCGGA TGATCCGCCT CGTCGGCCAG TTGCTGACGC TGGCCCGGCA GGAGCCCGGC GCCGCCGACA CGCAGCGTGG CCCGGTCGCG CTCGACGTCA TCGCCGCCGA GGTGGTCGCC GAGCTGTCGC CGGCCGCGCT GCAGAAGCGG ATCGATCTGG GCATCGCAGT GGAGTCGCAG CCGGCATCGG TCGGCGGCAA TGCCGATGCG CTGCGCGTGC TGCTGGTCAA CCTGGTCGAC AACGCCCTCT GCTACTGCCC CGAGGGCGCC CGCGTCGATG TGTCGACCGG GCATGCGCCG GATGGCGGCG CGCAGCTGAT CGTGGAAGAC AACGGCCCCG GCATCCCCGC CGCGGAGCGC GAACGCGTGC TCGATCGCTT CTACCGGCCC GCCCAGGCGC CCACCGGCGG CAGCGGGCTG GGCCTGGCCA TCGTGCGCGA GATCGCGCAG GCTCACGACG CCACGCTGTC GCTGGAGGCG CGCGAGGGCG GCGGCCTGCG GGTGGTGCTG CGGTTTCCGT TTCGCGCCGC GGCCTGA
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Protein sequence | MQSIRKTLLW WLSGGLLAGI VAATLLIYAQ ARQEANALFD YQMQQVAAAL PSQWIDPPPP ALAGIAHDDD VVIRIWDDTG RSLYLSHARP DLPTQAELGF SDVVTPEGTW RVYSVAFGPA VVQIAQPYSA RHEVAARMAL RTVAPLLILL PLLAWLVWLA VGRGLSPLGT VARQVQTRDA AALSPLPTHG LPAEIRPLTT ALNDLLARLG GALAHQRAFV ADAAHALRTP LAALKLQLQV ADRAQSEDER RAAHADLHRG VERMIRLVGQ LLTLARQEPG AADTQRGPVA LDVIAAEVVA ELSPAALQKR IDLGIAVESQ PASVGGNADA LRVLLVNLVD NALCYCPEGA RVDVSTGHAP DGGAQLIVED NGPGIPAAER ERVLDRFYRP AQAPTGGSGL GLAIVREIAQ AHDATLSLEA REGGGLRVVL RFPFRAAA
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