Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02104 |
Symbol | RSp1548 |
ID | 1223860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1949357 |
End bp | 1949869 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637241411 |
Product | hypothetical protein |
Protein accession | NP_523107 |
Protein GI | 17549767 |
COG category | [S] Function unknown |
COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.32134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACAC CTTCGATGTA CGCCTTCCTC GTTCCGGGCG TGAACCGCAT GCTCGGCAAT CTTTCCGCCT TGCTGGACAA GGGCGCCGCC CACGCGGAAG CCAAGCAATT CGATGTGGCC AACCTGCTGA CATCGCGTCT CGCGCCGGAC ATGCATCCGC TCACGCGCCA GGTGCAGATC GCGTGCGACA TGGCCAAGAG CGGCGCGGCC CGGCTGACGG GAACGGAGCT GCCCCGCTAC CCCGATGTGG AAACGACGAT TCCCGAGCTC AAGGCCCGCA TCGCCAAGAC GCTGGCGTTC GTCAACGGCA TCGACCCGGC AAGCTTCACC GGCAGCGAGG ACCGCGCCAT CACGCTGCAA GCGCCGAGCG GCGAGCTCAA TTTCACCGGA CTGGATTTCC TGCGCGGCTT CGTGCTGCCC AACCTGTATT TCCACGTCAC CATCGCGTAT GCGTTGCTGC GGCATGCGGG GGTTGAGATC GGCAAGCTCG ATTACATCGG CCGACCGGAC TGA
|
Protein sequence | MTTPSMYAFL VPGVNRMLGN LSALLDKGAA HAEAKQFDVA NLLTSRLAPD MHPLTRQVQI ACDMAKSGAA RLTGTELPRY PDVETTIPEL KARIAKTLAF VNGIDPASFT GSEDRAITLQ APSGELNFTG LDFLRGFVLP NLYFHVTIAY ALLRHAGVEI GKLDYIGRPD
|
| |