| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01966 |
|---|
| Symbol | RSp0742 |
|---|
| ID | 1223049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 932376 |
|---|
| End bp | 933023 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637240602 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | NP_522303 |
|---|
| Protein GI | 17548963 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.399653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.417137 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCAACT TCCTGCTTAC TTCCCGCGTT ATCCGTTCCC TGGCCGTGCT GGCCAGTTCC
GCCGCCCTGA TCACCGGTTG CGCGACCACT TCCGGGCCGC AGAGCGACGA GGCATTCGGC
AAGAGCATGT CGGAGGCCGA CGCTGCGGCC AAGGGCGGCC AGCAGGACAA GGCCATCGAC
CTCTACCAGC AGATCGCCAA GGCCAACCCG ACGCGCGACG AGCCGTGGGT GCGCATCGCC
CAGATCCAGT TCGGCTCGGA AAAGTATCCG CAGGCCATCC TGGCGGCGGA AGAAGCGCTG
CAGCGCGACA ACGGCGATCG CCAGGCCAAG AGCATCCTGG CCGTGAGCGG CCTGCGTGTT
GCCCGCCGCT CGCTGCAGGA GCTGCGTGCC GACAGCGCGC TGGCCGGCGA CGTCCGGACC
GATGCCCAGG TGCTGGCCAA GATGCTGCGC GACACGCTCG GCGAACAGGC CCTGTTCCCG
GCCGAGCAGC CCGCCAAGGC ACAGCCGCGC CGCGCCCGCG TGGTCAAGCG CAGCGCGCCG
GCAACGACTG AAGCCGCCAA CCACGGTGGG GCTGCCCCGG CAGCGCCCGC CACGCCCGCT
GCCGGCAACG GCGGCGGCAG CGCCGATCCG TTTGGCGCGC TGCGTTGA
|
|---|
| Protein sequence | MANFLLTSRV IRSLAVLASS AALITGCATT SGPQSDEAFG KSMSEADAAA KGGQQDKAID
LYQQIAKANP TRDEPWVRIA QIQFGSEKYP QAILAAEEAL QRDNGDRQAK SILAVSGLRV
ARRSLQELRA DSALAGDVRT DAQVLAKMLR DTLGEQALFP AEQPAKAQPR RARVVKRSAP
ATTEAANHGG AAPAAPATPA AGNGGGSADP FGALR
|
|---|
| |