| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01958 |
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| Symbol | RSp0750 |
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| ID | 1223057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 941920 |
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| End bp | 944676 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637240610 |
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| Product | putative VGR-related protein |
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| Protein accession | NP_522311 |
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| Protein GI | 17548971 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.917398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCAC CGACCGAGCT GGCCAACCTG CTGCGGGCCG CCTTCACGCA GGCCAATCGG
CTGCTGCGCC TGGATACGCC GCTCGGGCCG AACGCGCTGC TGCCCGAGCG GTTGGACGTC
GCCGAGCATC TCGACGATGG CGGCTTCCGG CTGGAGCTGA CCGCGCTGTC GGATGACGCC
GATCTCGATC CGGCGCGCCT GCTGGGGCAG CCCGTCCGGC TCGACCTGCT GACCCAGCAG
AGCCGCGGCG CGCTGCGGCC GTTCCATGGC CACGTCACGC GGTTCGAGCA GTTGGGCGCC
AACGGCGGCC TGGTGCGCTA CCGGCTGGTG ATCGAACCCT GGCTGGCCTT CCTGCGCCAC
CGGCGCGACA GCTTCCTGTT CCAGGACCAG TCGGTGATCG AAGTGATCGA CAGCCTGTTC
GGCGACTACA ACGGCCAGGG CCGCCTGGCG CCGGCGTGGC GCTGGTCGCT GCGCGATGCC
TCGGTGTACA CGCGCCGCAG CGTCATCACG CAATACGAAG AAAGCGATTT CGACTTCGTC
ACCCGCCTGC TGGCCGAGGA AGGGCTGTTC TACTTCTTCG AGCACGAGGC GGTCGAGGGC
GATGCGCTGG GCGTGCACCG CATGGTGATC GCCGATGCCA ACGATGTCTT CACCGACAAC
GCGCAGGCCG CGATCCGCTT CGGCCGCGCC GATGCCACCG CCAATGAAGA CGTGATCGAC
CGCTGGCAGG GCGTGCGGCG CTGGCAGACC AACGCCGTGT CGATCGCCAG TTGGGACTAC
CGCGCCAACA CCCAGCGCAG CGCCCAGCTC GGCGCGCAGC AGTGGCGCGA CGGCATCCCG
CAACTGACGC TGCAGGACAC CGACTACCCC GGCCAGTACT GGTTCGAAGA CAGCGCCCAG
GCCCAGCGCA GCGCGCGCCT GGTGATGGAA GCGCTGGAGC TGCGCGACAA GCAGTTCGAC
GGCGAAGGCA GCGTGCGCAC GCTGGCGCTG GGCACGCGCT TCCAACTGGT TGATCATTAT
GAGCACGGCG ACGACGGCGA GGCGCGCTTC GCCGTGCTGT CCGTCCTGCA CCGGGCACGC
AACAACTTCA ACGAGCGCTT TGGCCAGGTG CTGACGCAGG CGCTGGGCGC GCTGTCCGGC
GCCGACGCGC AAGACGCCGC GGGCAACGCG GGCACCGACG CCACGTTTTA CCGTAACCAC
TTCACGGTCG TGCACGATAC CGTGCCGTAC CGCCCGCAGC AGCGCGATGC GCAGGGCCGT
GCGCTGCATC CGCGTCCGAC GGTCGAGGGC AGCCAGACCG CACTGGTGGT GGGCACCGGT
GGCCCGGTGC ATACGGACCG CGATCATCGC ATCAAGGTCC AGTTCCATTG GCAGCGCGGC
GCACGCTCGG CCAGTCGGCA GCCGCATCCG GCCGGCGATG ACAACGCCCG CGCGGAGGCC
GGCCTGGGCT GCTGGGTGCG CGTGGCGGCG CCGGTGGCCG GGCCCAACTG GGGCGGCGTG
GCGTTGCCGC GCGTGGGCCA GGAAGTGCTG GTGGAATTCG TGCAGGGCGA TATCGACCGG
CCGGTGGTGG TGGGCGCGGC CTATAACGGC AGCGGCCAGC GCGACGCGCA GTACAACCAG
AACCAGGCCG GCGCGGCGGG CGCGACCGGC AACGCGCCGG CCTGGTTTGC CGGCGACAGC
AAGAGCCAGG GGGCGTACGC GCACAACGCG GTGCTCTCCG GCATCAAGAC GCAGGCGCTG
GCCGGCAGCC AGACGGGCGC CTCGGGTTAC AGCCAGCTCG TGTTCGACGA TACCGAGGGC
CAGGGCCGCA CGCAGCTGAG CACCACCCAG GCCGCCACCG CGCTCACGCT GGGGCACCAG
AAGGAACAGA TCGACAGCGC CCGCCAGGCC GACCTAGGAC ACGGCGCGGC GCTGGCCACC
AACGACAGCG GCAGCGTGCG CGCCGGCGCG GGCCTGCTGC TCACCGCGCA CGCCGCCGAC
ACCGGCGCCG CGCTTCTCGA CAGCGAAGGC GCCGCCAGCC AGATCGAAGC CCTCAGCGAA
CTGGCCGAAT CGCTGGCCGA CGTGGCCCGG AAGCAGCAGG CCGGCCTGCC GGAAGAGCCT
GCCGCGCAAG ACCTGCCCGC GCTCAAGCAA CTGCGGCACA CCACCGAAGT GCTGCGCCAC
GCGGAAAGCG CAGGCAAAGG CGCCTCGGCC ATCGCCTACA GCGAACCGCA TCTGCAAGTC
AGCGCGCCGA AGGGGATTGC CGCGACCACG CCGGCCGACG CCGTGCTGGT GGCCGGCACC
CAGATCGCAT TGGCGGCCAA GCAGGACGCC AACCTCGCGG CGGGCGGCAA CCTGGCAATG
GCCGTGGCCG ACGGCCTGAC CCTGTTCGCG CACGGCAAGG CGGTGGGCCA GTCATCCGAC
GCGGCCCGGG GCATCGCGAT GCATGCGGCG AGCGGCAAGG TGAGCTTGAG CGCCCTGAAG
GGCGAGAGCC GGCTGGTGGC CGAGAAAGCC GTCACGGTGG CATCCACGCA GGGCAATGTC
ACGGCGGAGG GCAAGGCGCG CGTGCTGGTG AATGCGGCGG GCGCGCAGAT CCGGGTGACC
AACGGGACGA TTGAGCTGCA TGCGCCGGGG AAGACGATCT TCAAGGGGGC GGGGCATGTG
TTTGTGGGGC CGGGTGGGGG GGCGGTGAGC AATACGCTGG CCCAGGGCAA TCTGAAGGGT
TGCGGCACCC AGGAAGGTAA TGCCGCAACG AAAGGCACAG GGTCGATTTC GCGCTGA
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| Protein sequence | MVSPTELANL LRAAFTQANR LLRLDTPLGP NALLPERLDV AEHLDDGGFR LELTALSDDA
DLDPARLLGQ PVRLDLLTQQ SRGALRPFHG HVTRFEQLGA NGGLVRYRLV IEPWLAFLRH
RRDSFLFQDQ SVIEVIDSLF GDYNGQGRLA PAWRWSLRDA SVYTRRSVIT QYEESDFDFV
TRLLAEEGLF YFFEHEAVEG DALGVHRMVI ADANDVFTDN AQAAIRFGRA DATANEDVID
RWQGVRRWQT NAVSIASWDY RANTQRSAQL GAQQWRDGIP QLTLQDTDYP GQYWFEDSAQ
AQRSARLVME ALELRDKQFD GEGSVRTLAL GTRFQLVDHY EHGDDGEARF AVLSVLHRAR
NNFNERFGQV LTQALGALSG ADAQDAAGNA GTDATFYRNH FTVVHDTVPY RPQQRDAQGR
ALHPRPTVEG SQTALVVGTG GPVHTDRDHR IKVQFHWQRG ARSASRQPHP AGDDNARAEA
GLGCWVRVAA PVAGPNWGGV ALPRVGQEVL VEFVQGDIDR PVVVGAAYNG SGQRDAQYNQ
NQAGAAGATG NAPAWFAGDS KSQGAYAHNA VLSGIKTQAL AGSQTGASGY SQLVFDDTEG
QGRTQLSTTQ AATALTLGHQ KEQIDSARQA DLGHGAALAT NDSGSVRAGA GLLLTAHAAD
TGAALLDSEG AASQIEALSE LAESLADVAR KQQAGLPEEP AAQDLPALKQ LRHTTEVLRH
AESAGKGASA IAYSEPHLQV SAPKGIAATT PADAVLVAGT QIALAAKQDA NLAAGGNLAM
AVADGLTLFA HGKAVGQSSD AARGIAMHAA SGKVSLSALK GESRLVAEKA VTVASTQGNV
TAEGKARVLV NAAGAQIRVT NGTIELHAPG KTIFKGAGHV FVGPGGGAVS NTLAQGNLKG
CGTQEGNAAT KGTGSISR
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