Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01917 |
Symbol | RSp0790 |
ID | 1223097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 995479 |
End bp | 996396 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637240650 |
Product | putative hydrolase protein |
Protein accession | NP_522351 |
Protein GI | 17549011 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.602694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0615168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGCC CTCATTGCCT CCAAACAACG CGGCAGTTTG CCTACCAGGA CACGCCGGTC AGCTATGCCG TCGAGCAATG CGACGCGGCC GGCGACGAGG CCGCGCAGCT CCTCTGTGTG CACGGCATTA CCCGCAACCG GCATGACTTC CATGTTCTGC TGCCGCAGCT GGCCGGGCGT TTCGGCGTCT GCGCGCCGGA TCTCGTCGGC CACGGCGACA GCGCCTGGGT GGGCGAGCGG CTGATGTACC GGTCCGAGCT GTTCCTGGCG CAACTGCGCC ATCTCATCGC CGCGCGGGCC GGCCAGGGTC GGGTCGGCTA TGTCGGCAGC TCCTACGGCG GCCTGCTGGG CATCGTGCTC GCGGCCGAGC CCGCGTCGCA GGTCGGCTGC CTGGTCATCA ACGACGCCGG CCCCGGCATC GACCCCGACC TGTACCAGCG CATCGCCAAG CTCATCGGCT ACTACCCCAG CTTCCAGTCG AAGACGGCGG CCGAGCAGTG GGCGCGCGCC GCGCTGCGGC AGGGCGGCGC GCTGCCCGAG TCGGTGGCCG ACCACGTGGT GCGCCATGCG ATCCGATCCC TGGGCGATGG CCGCTACGCG CTGCGCTACG ACCCGGCGCT GCCCAGGCTC TATACCGACG CGGGGGCGAA GCCGACCGAC ATCTGGCACC TCTGGGAGCA GGTGTCCTGC CCGGTGCTGC TGGTGCGGGG CGCGCGCTCG GAGGTCCTGA CGCCCGAGAT GGTCCGCCGC ATGAAGGTCA CGCATCCGGC GCTCGACGTC GTCGAGGTGG CGGATGCCGG CCACTGCCCC CACCTGATGA CGGCAGACCA GACCGACGTC GTCGCCGCCT GGCTCGCGTC CCACGCATCG CATCTTCAGC CCAATCCTTC ATTCACCGTT GAGACGAGCG CATCATGA
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Protein sequence | MQSPHCLQTT RQFAYQDTPV SYAVEQCDAA GDEAAQLLCV HGITRNRHDF HVLLPQLAGR FGVCAPDLVG HGDSAWVGER LMYRSELFLA QLRHLIAARA GQGRVGYVGS SYGGLLGIVL AAEPASQVGC LVINDAGPGI DPDLYQRIAK LIGYYPSFQS KTAAEQWARA ALRQGGALPE SVADHVVRHA IRSLGDGRYA LRYDPALPRL YTDAGAKPTD IWHLWEQVSC PVLLVRGARS EVLTPEMVRR MKVTHPALDV VEVADAGHCP HLMTADQTDV VAAWLASHAS HLQPNPSFTV ETSAS
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