| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01910 |
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| Symbol | RSp0797 |
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| ID | 1223104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1001389 |
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| End bp | 1002645 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240657 |
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| Product | transport transmembrane protein |
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| Protein accession | NP_522358 |
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| Protein GI | 17549018 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0394187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAC ACGTCAATAC ATCGGTGCCG GATACCGGCG CCCCGGTCGC CTGTCCGGCA
CGTACATCCG GCGATGCATG GAAGGCGCTG GCCGGGTCAG CGATCGGGTA TGCGATGGAC
GGTTTCGACC TGCTGATCCT CGGGTTCATG CTGCCGGCCA TCAGTGCGGC GCTGGCGCTC
ACCCCGGGCG AGTCGGGGGC CCTGGTGACC TGGACCCTGG TGGGGGCGGT CGCGGGCGGC
ATTCTGTTTG GCGCGTTGAG CGATGCTTAT GGCCGCGTGC GCGTGCTGAC CTGGACCATC
GTGTTGTTCG CGGTGTTTAC CGGCATGTGC GCATTCGCGC AGGGTTTCAC GGACCTGCTG
ATCTATCGGA CCATCGCCGG CATCGGCCTG GGCGGCGAGT TCGGCATCGG CATGGCGCTG
GCGGCCGAAG CCTGGCCGGC GCACAAGCGG GCCCGGGTCT CGTCCTATGT GGCGCTCGGC
TGGCAGTGCG GGGTGCTCCT GGCGGCGCTG CTGACACCGC TGCTGCTGCC GTTCATCGGC
TGGCGCGGCA TGTTCCTGCT GGGTGTTCTC CCGGCGGCGG TGGCCTGGTT CATCCGCAAC
AGGCTGCACG AGCCGGAACT GTTCGTGCGC CACGCCCATG CCCCGCGCGG GAAGACCAGC
GCCTTCAGGC TGCTCGTGTC GGATGCGCGC ACCCTGCGCA CCAGCCTGGG CATCGTCATC
CTCTGCGCGG TCCAGAACTT CGGCTACTAC GGGATCATGA TCTGGCTGCC CACGTATCTG
GGCAAGACGC TGGGCTTCTC GCTCACGAAG TCCGCCCTGT GGACTTCGGT GACCATCCTG
GGGATGATGC TCGGCATCGT CGCCTTCGGC CATCTGGCCG ACCGTATCGG CCGCAAGCCG
ACGTTCCTGA TCTTCCAGGC GGGCGCCGTG GCGATGGTGC TGACATACGC CCGCCTGACG
GACCCGCTCG CGCTGCTATG GGCCGGCGCG GTGATGGGCA TGTTCGTCAA CGGGATGATC
GGCGGATACG GCGCGCTCAT TTCCGAAGCG TTTCCGACGG CCGCCCGCGC CACGGCGCAA
AACGTGCTCT TCAACCTCGG CCGCGCGGTC GGCGGGTTCG GGCCGGTGGT GGTCGGCAGC
CTGGCCGCGG CGTATTCCTT CCGGACGGCG ATCGCGCTGC TGGCCGGCCT TTATGTGCTG
GACATGCTGG CCACGATGGC GCTCGTGCCC GAGCGCAAGG GGGCCGAACT GGCGTGA
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| Protein sequence | MDAHVNTSVP DTGAPVACPA RTSGDAWKAL AGSAIGYAMD GFDLLILGFM LPAISAALAL
TPGESGALVT WTLVGAVAGG ILFGALSDAY GRVRVLTWTI VLFAVFTGMC AFAQGFTDLL
IYRTIAGIGL GGEFGIGMAL AAEAWPAHKR ARVSSYVALG WQCGVLLAAL LTPLLLPFIG
WRGMFLLGVL PAAVAWFIRN RLHEPELFVR HAHAPRGKTS AFRLLVSDAR TLRTSLGIVI
LCAVQNFGYY GIMIWLPTYL GKTLGFSLTK SALWTSVTIL GMMLGIVAFG HLADRIGRKP
TFLIFQAGAV AMVLTYARLT DPLALLWAGA VMGMFVNGMI GGYGALISEA FPTAARATAQ
NVLFNLGRAV GGFGPVVVGS LAAAYSFRTA IALLAGLYVL DMLATMALVP ERKGAELA
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