Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01902 |
Symbol | RSp0805 |
ID | 1223112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1016078 |
End bp | 1016797 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240665 |
Product | putative transcription regulator protein |
Protein accession | NP_522366 |
Protein GI | 17549026 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.980965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.145891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCG CCCCCAGTCC GCCTGCCTTG CCTGGTGCCC AGGCCTATCG CGAACGCCTG CATGCCAGCA GCTGGTTCGG CGCGCTCGGC ACGCCCTTGC AGGACGCCCT GATCGGCATG GCGGTCGTGC GCCGGCTCGG CGGCGGCGAC ATGCTGTTCC GCAGGGGCGA TCCGTCCGAC GGGCTGTATT GCGTGGTGGA GGGCGCGATC CGTATCGGTG CCACCAGCGC GGAGGGGCGC GAGTCGCTGC TGGCGGTGCT GGAGCCGGTC AACTGGTTCG GCGAGATCGG CGTGCTCGAC CGCCAGGCCC GCACCCATGA CGCCCGCGCC GACGACGGCG CCCTGCTGCT GCACATGCCC CAGGCCCCGC TGGTGGCACT GCTGGACAGT GCGCCGGCAT CCCTGCGCGC CTTCGCCCTG CTGCTCACCC ACAAGCTGCG GCTGACCTTC ACGGTGCTGG AAGAAACCGC CCTGCTGCCC ACCGCCGAAC GCGTCGCCCG GCGCCTGCTG CTGATGGCCG ACGGCTACGG TGACCTGCGC CTGGGCACCC GGCGCGTGCT GCGCGTGCCG CAAGAGCAGT TGGCCCTGCT GCTGGCGCTG TCCCGCCAGA CCGTCAACCA AGTGCTCAAG GACTTCGAGG CCCGCGGCCT GCTGCGGCTG GCCTATGGGG AGATCGAGCT GCTCGACTTC GCCGGCCTGC GCGCGCTGGC GCGGGGGTGA
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Protein sequence | MDLAPSPPAL PGAQAYRERL HASSWFGALG TPLQDALIGM AVVRRLGGGD MLFRRGDPSD GLYCVVEGAI RIGATSAEGR ESLLAVLEPV NWFGEIGVLD RQARTHDARA DDGALLLHMP QAPLVALLDS APASLRAFAL LLTHKLRLTF TVLEETALLP TAERVARRLL LMADGYGDLR LGTRRVLRVP QEQLALLLAL SRQTVNQVLK DFEARGLLRL AYGEIELLDF AGLRALARG
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