Gene RS01652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS01652 
SymbolRSp0881 
ID1223188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1113571 
End bp1115874 
Gene Length2304 bp 
Protein Length767 aa 
Translation table11 
GC content70% 
IMG OID637240741 
Productputative transmembrane protein 
Protein accessionNP_522442 
Protein GI17549102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.993678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0258768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGG CGAGCGAAGC ATTGGGGGTG CCGGGCACGG CAGATCTGGC GGATGGCGGC 
CTTGAGAGTG CCGCCCGGCG ACAATTCATG TATGGCCTGG GCGCCGTACT GGTGTCCGGC
TGCGGCGGCG AGGGGGACGC CGGCAGCGAC GGGACCCTTG CCACTGCCAC CACGAGCAGC
ACCGGCATCC CCGCCACCGG AGCCGGCGCC ACGCGCGCGG CAACGGGCGC CACGGCAGGC
AGCGCGTCGC CCGAGGCCTC GGGCAGTGCC ACGGCAGTGC GGAACTTCAC GCACCCGGGC
CTGCTGCATA CCGAGGCGGA CTTCGCCCGC ATGCGCGCCA AGGTGGCCGC CCAGGCCGCG
CCCTGGATCG ACGGCTGGAA CGTGCTGATC GCCAACGGCC ACACCAGCCT GTCGCGCAAC
CCGAATCCGC AGGCGGCCAT CTACCGCGGC AACGACGGTG CGCACGCGCA GAACTACGGG
ACCCTCTACA ACGACATCGC GGCGGCCTAC GGTTGCGCGC TGCGCTGGAA GGTCTCGGGC
GACACGGCCT ACGCCGACAA GGCCGTGCAG TACCTGGACG CCTGGTCATC CAAGCTGACG
CTGATCGGCG GCGACACCAA CGCGGCGCTG GCGGCCGGCA TCTACGGCTA CGAATTCGCC
AATGCGGGCG AGATCATGCG CGGCTACGCC GGCTGGACGG CCTCGGGCCT GGCGGCGTTC
CAGAAGATGA TGCGCAACGT CTTCTACCCG ATCAACCACG ACTTCCTGAA CCGCCACAAC
AACACCGAGG TCACGCACTA CTGGGCCAAC TGGGACTTGT GCAACCTGGC CTCGGTGCTC
GCCATCGGCG TGCTGTGCGA CGACGCCAGC CTGTTCGACG AGGCCATCGC CTACTTCAAG
GGCGGCGCGG GCAACGGCTG CATCGGGCAG GCGGTCTATT ACGTGCATCC GGGCTACCTG
GGTCAATGGC AGGAGACCGG CCGCGACCAG GGCCACAACA CGCTGGGCAT CGCGCTGGGC
GGCGCCATCT GCGAGATGGC GTGGAACCAG GGCGTCGACC TGTACGGCTT TGACAACAAC
CGCTTCCTGG CCGGCGCCGA ATACGTGGCC AAGGCCAACC TGATTGAATC GGGCGGCACG
TACCACACCG TGCCGTACGT CACCTACCGG AACGTGGACG TGACGCAGAC GGCGTTCTCC
ACGGCCGCGC AGGGCACCGT GCGGCCGTGC TGGGCGCTGG TCGCCAACCA CTACATCAAC
CGCAAGGGGC TGGCCGCGCC CTATTCCAAA CAGTTCGCGG CGCAGATCCA GCCCGAGGGC
GGCGGCGGCA ACTACGGCCC CAACAGCGGC GGCTACGACC AGCTCGGCTA CGGCACCCTC
ACCTGCACGC GCGACGCCGG CACGCCGGCC GCCGCGCCGA GCGGCCTGAC CGGCCATGCC
ACGGCGGGCA GCGTCGTGCT CTCGTGGTGG GGCTGCAGCC ATGCCACCGG CTACACCGTC
AAGCGCGCCA CCATCGCGGG CGGCCCCTAT ACCGCTGTGG CCAGCGGCAT CACCGACCTG
CTGAGCTGGA CCGACACGCC GCCGGCCGCC GGCACGTACT ACTACGTGGC GACCGCGCAG
ACGGCCTCGG GCGAGTCCGC GGCATCGAAC GAGGTCAAGG TGGTGACGGC CATCCGGCTG
CACACCGAGC TGTCGTTCAG CGAGGGCAGC GGCACCGTGG CCGCCGACAG CAGCGGCAAC
GGCCATGCCG GCACGCTCGC GGGCGGCGCG GCCTGGGCTA CGGGGCGCAG CGGCCACGCC
GTGTCGCTCA GCGTGGGTGC CTACGTGGCC CTGCCCGCCG ACCTGCTGGC CGACGTGTCG
GACTGCACCC TCTCGGCCTG GGTTTTCTGG ACCGCCGCGC AGACCAACAC CCGCATCTTC
GACTTCGGTT CCGGCACCGG GCATTACCTG ATGCTGACGC CGCGCCACGG CAGCGGCGCC
GGCGCGGTGC GCTGTGCCAT CACCGTCAAC GGGCGCTTCG GCGAGCAGTC CATCGACGGG
ACCGCCGCGC TGCCGGCTGG CCAATGGGTG CACGTGGCGG TCACGCTGTC AGGCTCGACC
GGCACGCTGT ACGTGAACGG CACCGCTGTC GGCACGAATA CCGCGATGTT CCTGGCGCCC
TTCCGCCTTG GCAGCACCAC GCAGAACTGG CTGGGCCGGT CGCAATACAG CGCCGACCCC
GGCTTCAACG GTCTGATCGA CGATTTCCGC ATTCACCGCG GCGCGCTCTC GGCCACGCAA
ATCGCCGAGC TGATGCGCAA CTGA
 
Protein sequence
MNQASEALGV PGTADLADGG LESAARRQFM YGLGAVLVSG CGGEGDAGSD GTLATATTSS 
TGIPATGAGA TRAATGATAG SASPEASGSA TAVRNFTHPG LLHTEADFAR MRAKVAAQAA
PWIDGWNVLI ANGHTSLSRN PNPQAAIYRG NDGAHAQNYG TLYNDIAAAY GCALRWKVSG
DTAYADKAVQ YLDAWSSKLT LIGGDTNAAL AAGIYGYEFA NAGEIMRGYA GWTASGLAAF
QKMMRNVFYP INHDFLNRHN NTEVTHYWAN WDLCNLASVL AIGVLCDDAS LFDEAIAYFK
GGAGNGCIGQ AVYYVHPGYL GQWQETGRDQ GHNTLGIALG GAICEMAWNQ GVDLYGFDNN
RFLAGAEYVA KANLIESGGT YHTVPYVTYR NVDVTQTAFS TAAQGTVRPC WALVANHYIN
RKGLAAPYSK QFAAQIQPEG GGGNYGPNSG GYDQLGYGTL TCTRDAGTPA AAPSGLTGHA
TAGSVVLSWW GCSHATGYTV KRATIAGGPY TAVASGITDL LSWTDTPPAA GTYYYVATAQ
TASGESAASN EVKVVTAIRL HTELSFSEGS GTVAADSSGN GHAGTLAGGA AWATGRSGHA
VSLSVGAYVA LPADLLADVS DCTLSAWVFW TAAQTNTRIF DFGSGTGHYL MLTPRHGSGA
GAVRCAITVN GRFGEQSIDG TAALPAGQWV HVAVTLSGST GTLYVNGTAV GTNTAMFLAP
FRLGSTTQNW LGRSQYSADP GFNGLIDDFR IHRGALSATQ IAELMRN