Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01652 |
Symbol | RSp0881 |
ID | 1223188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1113571 |
End bp | 1115874 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637240741 |
Product | putative transmembrane protein |
Protein accession | NP_522442 |
Protein GI | 17549102 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.993678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0258768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGG CGAGCGAAGC ATTGGGGGTG CCGGGCACGG CAGATCTGGC GGATGGCGGC CTTGAGAGTG CCGCCCGGCG ACAATTCATG TATGGCCTGG GCGCCGTACT GGTGTCCGGC TGCGGCGGCG AGGGGGACGC CGGCAGCGAC GGGACCCTTG CCACTGCCAC CACGAGCAGC ACCGGCATCC CCGCCACCGG AGCCGGCGCC ACGCGCGCGG CAACGGGCGC CACGGCAGGC AGCGCGTCGC CCGAGGCCTC GGGCAGTGCC ACGGCAGTGC GGAACTTCAC GCACCCGGGC CTGCTGCATA CCGAGGCGGA CTTCGCCCGC ATGCGCGCCA AGGTGGCCGC CCAGGCCGCG CCCTGGATCG ACGGCTGGAA CGTGCTGATC GCCAACGGCC ACACCAGCCT GTCGCGCAAC CCGAATCCGC AGGCGGCCAT CTACCGCGGC AACGACGGTG CGCACGCGCA GAACTACGGG ACCCTCTACA ACGACATCGC GGCGGCCTAC GGTTGCGCGC TGCGCTGGAA GGTCTCGGGC GACACGGCCT ACGCCGACAA GGCCGTGCAG TACCTGGACG CCTGGTCATC CAAGCTGACG CTGATCGGCG GCGACACCAA CGCGGCGCTG GCGGCCGGCA TCTACGGCTA CGAATTCGCC AATGCGGGCG AGATCATGCG CGGCTACGCC GGCTGGACGG CCTCGGGCCT GGCGGCGTTC CAGAAGATGA TGCGCAACGT CTTCTACCCG ATCAACCACG ACTTCCTGAA CCGCCACAAC AACACCGAGG TCACGCACTA CTGGGCCAAC TGGGACTTGT GCAACCTGGC CTCGGTGCTC GCCATCGGCG TGCTGTGCGA CGACGCCAGC CTGTTCGACG AGGCCATCGC CTACTTCAAG GGCGGCGCGG GCAACGGCTG CATCGGGCAG GCGGTCTATT ACGTGCATCC GGGCTACCTG GGTCAATGGC AGGAGACCGG CCGCGACCAG GGCCACAACA CGCTGGGCAT CGCGCTGGGC GGCGCCATCT GCGAGATGGC GTGGAACCAG GGCGTCGACC TGTACGGCTT TGACAACAAC CGCTTCCTGG CCGGCGCCGA ATACGTGGCC AAGGCCAACC TGATTGAATC GGGCGGCACG TACCACACCG TGCCGTACGT CACCTACCGG AACGTGGACG TGACGCAGAC GGCGTTCTCC ACGGCCGCGC AGGGCACCGT GCGGCCGTGC TGGGCGCTGG TCGCCAACCA CTACATCAAC CGCAAGGGGC TGGCCGCGCC CTATTCCAAA CAGTTCGCGG CGCAGATCCA GCCCGAGGGC GGCGGCGGCA ACTACGGCCC CAACAGCGGC GGCTACGACC AGCTCGGCTA CGGCACCCTC ACCTGCACGC GCGACGCCGG CACGCCGGCC GCCGCGCCGA GCGGCCTGAC CGGCCATGCC ACGGCGGGCA GCGTCGTGCT CTCGTGGTGG GGCTGCAGCC ATGCCACCGG CTACACCGTC AAGCGCGCCA CCATCGCGGG CGGCCCCTAT ACCGCTGTGG CCAGCGGCAT CACCGACCTG CTGAGCTGGA CCGACACGCC GCCGGCCGCC GGCACGTACT ACTACGTGGC GACCGCGCAG ACGGCCTCGG GCGAGTCCGC GGCATCGAAC GAGGTCAAGG TGGTGACGGC CATCCGGCTG CACACCGAGC TGTCGTTCAG CGAGGGCAGC GGCACCGTGG CCGCCGACAG CAGCGGCAAC GGCCATGCCG GCACGCTCGC GGGCGGCGCG GCCTGGGCTA CGGGGCGCAG CGGCCACGCC GTGTCGCTCA GCGTGGGTGC CTACGTGGCC CTGCCCGCCG ACCTGCTGGC CGACGTGTCG GACTGCACCC TCTCGGCCTG GGTTTTCTGG ACCGCCGCGC AGACCAACAC CCGCATCTTC GACTTCGGTT CCGGCACCGG GCATTACCTG ATGCTGACGC CGCGCCACGG CAGCGGCGCC GGCGCGGTGC GCTGTGCCAT CACCGTCAAC GGGCGCTTCG GCGAGCAGTC CATCGACGGG ACCGCCGCGC TGCCGGCTGG CCAATGGGTG CACGTGGCGG TCACGCTGTC AGGCTCGACC GGCACGCTGT ACGTGAACGG CACCGCTGTC GGCACGAATA CCGCGATGTT CCTGGCGCCC TTCCGCCTTG GCAGCACCAC GCAGAACTGG CTGGGCCGGT CGCAATACAG CGCCGACCCC GGCTTCAACG GTCTGATCGA CGATTTCCGC ATTCACCGCG GCGCGCTCTC GGCCACGCAA ATCGCCGAGC TGATGCGCAA CTGA
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Protein sequence | MNQASEALGV PGTADLADGG LESAARRQFM YGLGAVLVSG CGGEGDAGSD GTLATATTSS TGIPATGAGA TRAATGATAG SASPEASGSA TAVRNFTHPG LLHTEADFAR MRAKVAAQAA PWIDGWNVLI ANGHTSLSRN PNPQAAIYRG NDGAHAQNYG TLYNDIAAAY GCALRWKVSG DTAYADKAVQ YLDAWSSKLT LIGGDTNAAL AAGIYGYEFA NAGEIMRGYA GWTASGLAAF QKMMRNVFYP INHDFLNRHN NTEVTHYWAN WDLCNLASVL AIGVLCDDAS LFDEAIAYFK GGAGNGCIGQ AVYYVHPGYL GQWQETGRDQ GHNTLGIALG GAICEMAWNQ GVDLYGFDNN RFLAGAEYVA KANLIESGGT YHTVPYVTYR NVDVTQTAFS TAAQGTVRPC WALVANHYIN RKGLAAPYSK QFAAQIQPEG GGGNYGPNSG GYDQLGYGTL TCTRDAGTPA AAPSGLTGHA TAGSVVLSWW GCSHATGYTV KRATIAGGPY TAVASGITDL LSWTDTPPAA GTYYYVATAQ TASGESAASN EVKVVTAIRL HTELSFSEGS GTVAADSSGN GHAGTLAGGA AWATGRSGHA VSLSVGAYVA LPADLLADVS DCTLSAWVFW TAAQTNTRIF DFGSGTGHYL MLTPRHGSGA GAVRCAITVN GRFGEQSIDG TAALPAGQWV HVAVTLSGST GTLYVNGTAV GTNTAMFLAP FRLGSTTQNW LGRSQYSADP GFNGLIDDFR IHRGALSATQ IAELMRN
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