| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00871 |
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| Symbol | RSp0414 |
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| ID | 1222721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 523458 |
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| End bp | 525698 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637240274 |
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| Product | ferric siderophore receptor protein |
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| Protein accession | NP_521975 |
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| Protein GI | 17548635 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.619675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.877748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCCT CGCTTCGCCG CAAGCCCGCC TCGGCCATGC CGCTACCTGC CCGCGGGTCC
GGGGCACCGT TCCGGCCGTT GGCCCTGACC GCGCGCATGG CGTTCGCGGG CGTGCTGACC
TCCGGGCTCG GGCTGCCCGC CTTCGCGCAG AGCGTGTCCA AGTCGGCCAC GGAGACCGCC
GAGCAGGCCA TCCAGCTGCC GGAAACGGTG GCGACCGGCC GCACCTCCGA CGACCCGCTG
CGCCCGTACG CAGGCGGGCA GACCGCGCGC GGCGGCCGCG TGGGCCTGCT CGGCAACCAG
GACACCATGG ACACGCCCTT CAGCGTCAGC ACCACCACCG CCAGGCGCAT GGAAGACCAG
CAGGCCACCA CGCTGGCCGA TGTGCTGAAC AAGGATGCGT CGGTACGCTT CACCGGCCAG
ACCGGCGGCG TGACGGACTC CTTCTACATC CGCGGCTTCC CCGTCGGCGA AGGCAACCTG
AGCGAGGTGG CGTTCGACGG CGTCTACGGT GTCGCGCCCA ACTACCACGT CTTTCCGGAG
TACGTGGAGC GCGTCGAAGT CATCAAGGGG CCGGCCGCGC TGCTCTACGG CATGTCGCCC
AACAGCGGCG TGGGCGGGGT GGTCAACATC GCGCCCAAGC GCGCGCTACC GCAAGACCTG
ACCCACTTCA CGGCAACCTA CGCCTCCGAC CTGCAGCTGG GCGGCCACAT CGACCTGAGC
CGGCGCTTCG GCCAAGGGCG GGCGTTCGGC ATCCGCTTCA ACGGCGTGGC CCGCCAGGGC
AAGACCCCGC TCGACCACCA GCGCTCGCGC ACCGACATCG GCGCGCTGTC GCTCGACTAC
CAGGGCGACC GCCTGCGCGC CTCGCTCGAC GTCATCACGC AGCACGAAGC GGTGGATGCG
CCCACGCGCC CCTTCCTGCT GGCCGCCGGC GTGGCCATGC CTTCGGCGGC GGATGGGCGT
CGCAACGTCT CGCAGCCGTG GGGCTGGTGG AAATCGGACG GACAGTCGGC GCTGGCGCAT
GCGGAATACG ACGTCTCCGA CCGCGTCACC GTGTTCGCCG ACGCGGGCGG CTCGCAGACC
CGCATCGGCC GGCTGTCGGA CCAGACCCCG ACCCTCCTCG ACGCGGCGGG CAACACCCGG
TCGACGCCGG GCTACTACAA GTTCCAGGTC AACCGCCTGA GCGCCGACGC CGGCGTGCGC
GCGCGCGTCG ACACCGGCCC GGTCAGGCAC GCCCTGGCGC TGCAGGCCAG CACCTATCAC
GATCGCATCG CCACGGCCAG CAACATGGGC ACGGCGATCC TGTCGAACCT CTATGCGCCG
GTGAACGCGC CCGAGCCGTT CATCGCCGCG CCGGCCGCGG TGCCGAAGAC CTCGTCGTCG
CAGCTGTCCG GCGTGGCCCT GGCCGATACG ATGGGCGTGC TCGACGATCG CCTGCAGCTG
ACGCTCGGAC TGCGGCAGCA GCAGGTCAAC TCCGACAACT TCAGCGCCAG CACCGGTGCC
GTCACGGCTT CGTACGACAA GCGCGCGGTG ACGCCGATGG CGGGCATCGT CATCAAGCCC
TGGCGGGGCG ACGTCTCGCT GTACGCCAAC TACATCGAGG GGCTGAGCAA GGGCGACATC
GCCCCGACCA CGGCATCGAA CGCGGGCCAG GTCTTCGCGC CGTACAAGAC CCGGCAGTAC
GAGGCCGGCG TCAAGGTGGA CCGCAACGGC CTGCTGGCCA CGCTCGCCGT GTTCCAGATC
ACCAAGCCCA GCGGCCAGCT GACCGGCACC GTCTACGGCG TGGACGGCGA GCAGCGCAAC
CGCGGCGTGG AGCTGAACCT GTCCGGCGAG CCGGTCAGGG GCGTGCGGCT GCTGGGCGGC
GTGACCGTGC TCGACGCCGT GCTGACCAAG ACCAACAGCG CCGCCACGGT CGGCAACCGT
CCGGTGGGCG TGCCGGGCCT GATGGCCAAT GCCGGCGCCG AATGGGACCT GCCATGGATG
CCCGGCCTGG CGCTGAACGG CAGCGTCACC TACACAGCCA AGGAATACAT CAACCAGGCC
AACACGCAGT CGGTGCCGTC GTGGACCACG GTGGACGTGG GCGCGCGCTA CACCACCAGG
CTGCAGGGCA AGTCCACCAC CTTCCGCGCC ACCGTGCTGA ACGTGCTCGA CCGCAAGTAC
TGGTCGGGCG TGGCGTCGTT CGGGACCATT TCGCTGGGCG CGCCGCGCAC GGTGCTGCTG
TCGGCTGCGG TGGATTTCTG A
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| Protein sequence | MLSSLRRKPA SAMPLPARGS GAPFRPLALT ARMAFAGVLT SGLGLPAFAQ SVSKSATETA
EQAIQLPETV ATGRTSDDPL RPYAGGQTAR GGRVGLLGNQ DTMDTPFSVS TTTARRMEDQ
QATTLADVLN KDASVRFTGQ TGGVTDSFYI RGFPVGEGNL SEVAFDGVYG VAPNYHVFPE
YVERVEVIKG PAALLYGMSP NSGVGGVVNI APKRALPQDL THFTATYASD LQLGGHIDLS
RRFGQGRAFG IRFNGVARQG KTPLDHQRSR TDIGALSLDY QGDRLRASLD VITQHEAVDA
PTRPFLLAAG VAMPSAADGR RNVSQPWGWW KSDGQSALAH AEYDVSDRVT VFADAGGSQT
RIGRLSDQTP TLLDAAGNTR STPGYYKFQV NRLSADAGVR ARVDTGPVRH ALALQASTYH
DRIATASNMG TAILSNLYAP VNAPEPFIAA PAAVPKTSSS QLSGVALADT MGVLDDRLQL
TLGLRQQQVN SDNFSASTGA VTASYDKRAV TPMAGIVIKP WRGDVSLYAN YIEGLSKGDI
APTTASNAGQ VFAPYKTRQY EAGVKVDRNG LLATLAVFQI TKPSGQLTGT VYGVDGEQRN
RGVELNLSGE PVRGVRLLGG VTVLDAVLTK TNSAATVGNR PVGVPGLMAN AGAEWDLPWM
PGLALNGSVT YTAKEYINQA NTQSVPSWTT VDVGARYTTR LQGKSTTFRA TVLNVLDRKY
WSGVASFGTI SLGAPRTVLL SAAVDF
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