Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00863 |
Symbol | RSp0406 |
ID | 1222713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 514375 |
End bp | 516027 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637240266 |
Product | hypothetical protein |
Protein accession | NP_521967 |
Protein GI | 17548627 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.662656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAACC AGCAAAACGA CGGCAAGCGC GACGACGCGT GGTGGCTCGA CCAGTGGAAG CAGTCCGACG CCGTGCTCAG GCGCCAGCAG CAGGCCCGCG AGCGTGCGTG GCCCGGCTAT GTCAAGGAGC AGACCGAACG GGCGCGCTAC TCGGCCTGGC TGGTGCTGCC CTGCAATGCC AGCGACTACG GCATGCGCGC CCTGCCCTCC GGCACGCCGT ACTGGGCCTC GCCCTTCATC TGGGCCGAGA GCCCGAGCCC GTCGGGCAAC CCGGTGGCCG GCGCCGAGAA CCACATCGTG GCCCGCATCT TCAACCTCGG CGCGGCAACG GCCGCGCCCA CCAAGGTCGA TTTCTTCTGG AGCGATCCGT CGGTGGGCCT GGGCGCGGCG GATGCCCATT TCATCGGCAC CGAGTACGTC GAAGTCCAGC CGATGACCTC GCAGGTCGTG CGCTGCGCCA CGCCATGGAT TCCCAGCTAT CTGAATGACG GCCACGAGTG CGTCTTCGTC CAATGCGACA ACCACGTGCT GGACCCGCTG CTGCTGCCCT TCCAGCCCTG GGCCGATCGC CATGTGGGCC AGCGCAACAT GCACGTGCTG CCGGCCGTCG CGCAAGCTTT CCACCTTTGG GCGCCGGCGG GCATCGAGGG GGTGCGTGCA GAACTGCGTG TCACGGCACT GCACGCAGTG CTGCGCGCCC TGCCCGACCG GCGCCTTCCG CCCGCGCGGT TCTTCAGCGA GGCGGCGGCG CGGCTGCTGA CCGGGCTGGT GCCTCCGCAG GTCACCGCCC GGCGCGAGGC CGGCAACGCC GCGCCGCCAC CGCCGCCGGT CATCGCGAAG CTGCTGGACG CGCAGGACGT CATCGAATCG GCACACCTCA CCGAGGCCAT CCAGCGGCGC CAATGCGGCG GCGAACACCC GGCCGGCTGC TGCGGCAACA AGGGCGCCGG GGGCGCCGCC GAGGGCGCGC CGCAACCCTG CGGCATGCCG GCCCGCGATG CCGGTGCCGG CAGGCAGCAC CTGCTGTTCA TCGATGGCGA ACCCGGCACG GCGCGCCAGA TCGCGCTCCA GTTGCGCGCC ATCCCGCTGC AGGCCCACGA ATTTGTTGTG TTGAACGTGA CGCTCGTGTC CGCGGGCGTC ATCCGCGGCG GGTACGTGCT GGTCCTCGTG CATCCGGACT GGCTCAAGGA CCCGCTGACG CATTCATCAA AGGAGAACGC CATGCAACCA GCCGGCGCGA ATCAGGGCAA TGATCTGCGG GACCTCGTCA TCGAGCAGTT CCCGCAGGCG CGGCTCACCC TGGAAGTCGC ACGCATGCTG CACAGCCATT TGCCGATCAC CTCTGCCGAC GCGCTTGAGC AGGCCGCGAA GTACGGCACC ATCGGCGGCC ATCCCATCGC GGCGGGCATG ATCGAGCGGA TGGGCATCAA GCAATTGCTG CCGATCCAGG ACAGCAAGGA CCTCGTGCGC AAGATCGCCG GCGTGCTGAC CGTCGCCGCA CACCAGGGCG GCCAGGGCAC GCCCGTGGGC GATGCCGTCG CCAACGTGGC GGCCGGGCTG CTGCGCCGCG GCGAGGCCGC CGGCCCGTCG ATTCCGACGC ATCACTTCAG CGGCGGCTCG GTGTTCGGGT CCACGCGCGC CAAAGGAGAA TGA
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Protein sequence | MGNQQNDGKR DDAWWLDQWK QSDAVLRRQQ QARERAWPGY VKEQTERARY SAWLVLPCNA SDYGMRALPS GTPYWASPFI WAESPSPSGN PVAGAENHIV ARIFNLGAAT AAPTKVDFFW SDPSVGLGAA DAHFIGTEYV EVQPMTSQVV RCATPWIPSY LNDGHECVFV QCDNHVLDPL LLPFQPWADR HVGQRNMHVL PAVAQAFHLW APAGIEGVRA ELRVTALHAV LRALPDRRLP PARFFSEAAA RLLTGLVPPQ VTARREAGNA APPPPPVIAK LLDAQDVIES AHLTEAIQRR QCGGEHPAGC CGNKGAGGAA EGAPQPCGMP ARDAGAGRQH LLFIDGEPGT ARQIALQLRA IPLQAHEFVV LNVTLVSAGV IRGGYVLVLV HPDWLKDPLT HSSKENAMQP AGANQGNDLR DLVIEQFPQA RLTLEVARML HSHLPITSAD ALEQAAKYGT IGGHPIAAGM IERMGIKQLL PIQDSKDLVR KIAGVLTVAA HQGGQGTPVG DAVANVAAGL LRRGEAAGPS IPTHHFSGGS VFGSTRAKGE
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