| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00759 |
|---|
| Symbol | RSp0354 |
|---|
| ID | 1222661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 459717 |
|---|
| End bp | 460976 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637240214 |
|---|
| Product | putative oxidoreductase protein |
|---|
| Protein accession | NP_521915 |
|---|
| Protein GI | 17548575 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.134999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0681702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGA AACAGGATCC ACTCAATCAT CCGGAATCCG TGGACGTAGC CATCATTGGC
GCGGGCCCCG CCGGAGCCGT CGCTGCCGCC CTGTTGAGAC AGGCTGGGCA GCAGGTGCTC
GTGCTCGAAC GGCAACATTT TCCGCGTTTC TCGATCGGCG AGAGCCTGCT GCCGCAGAGC
ATGGCGTATC TGGAGCAGGC CGGCATGCTG CGCGCCGTGG TCGAGGCCGG TTTCCAGTAC
AAGAACGGCG CGTATTTTGT CCATGGCGAC AAGACCGCCG CTTTTGACTT CCGCGACAAA
CACTCCGATG GCTGGGGAAC GACCTACCAG GTCGAACGTG CCGCCTTTGA CCAGATCCTG
ATCAACTGCG CGGCCGATCA GGGCGCGGAC GTACGCTTCG GCCACAGCGT GCGCGCCGTG
CAGCCCGGCG ACGCGCCGGT GCTTGAGGTC CAGACCGAAT CCGGTGACAC CTACACCGTG
CACGCCCGGT TCATCCTGGA TGCCAGCGGA TTCGGACGCG TGCTGCCCCG CCTGCTGAAC
CTTGAGGCAC CGACCGGCAT GCCGCTGCGC GCGGCCCTTT TCTCGCACGT ACAGGATGCC
TTGCCGGCCG GCATGACCGA CCGCAACAAG ATCTGCATCG CCGTCCATCC CGAGCGGCGC
GATGTCTGGT ATTGGATGAT CCCGCTCGCA AACGGCCGCT CTTCGGTCGG CTGCGTGGCA
GAAGCCAGCT TTCTCGATAT TCCCGAGGCC GAGCGCGAGG CCGCGTTGCG GGCGCTGATT
CGAGCCGAGC CCAACATCGC CTCCCTGATC GGGGATGCCC CCTTCCTGAT GCCCGTGCGC
CATATCGGGG GATACGCCGC CAACGTCGAG AAACTGCATG GCCCCGGCTA CGCGCTGCTC
GGCAACGCCG GTGAATTCCT GGACCCCGTG TTCTCTTCCG GCGTGACGAT TGCCCTTCGC
TCGGCTGATC TCGCCGTGCG AGCGCTGTTG CGACAGCTTG CCGGTGAAAC GGTGGACTGG
CAGAGCGTCT ACGACGTGCC ACTGCGGCGC GGCATCGACA CGTTCCGCGC GTTTATTGAA
CGGTGGTACA CGGGTGAACT GCAAGACATC ATTTTCCACC CGCAGCAGGC ACCCGGCATT
CGGCGCATGA TCAGCGCAAT ACTGGCGGGT TACGCCTGGG ACGAAACCAA CCCTTTCGTT
GCGGACCCGG TACGGCGCCT GAACACATTG CACGAAGTTT GCCGGCTCGA AGCAGTCTGA
|
|---|
| Protein sequence | MIKKQDPLNH PESVDVAIIG AGPAGAVAAA LLRQAGQQVL VLERQHFPRF SIGESLLPQS
MAYLEQAGML RAVVEAGFQY KNGAYFVHGD KTAAFDFRDK HSDGWGTTYQ VERAAFDQIL
INCAADQGAD VRFGHSVRAV QPGDAPVLEV QTESGDTYTV HARFILDASG FGRVLPRLLN
LEAPTGMPLR AALFSHVQDA LPAGMTDRNK ICIAVHPERR DVWYWMIPLA NGRSSVGCVA
EASFLDIPEA EREAALRALI RAEPNIASLI GDAPFLMPVR HIGGYAANVE KLHGPGYALL
GNAGEFLDPV FSSGVTIALR SADLAVRALL RQLAGETVDW QSVYDVPLRR GIDTFRAFIE
RWYTGELQDI IFHPQQAPGI RRMISAILAG YAWDETNPFV ADPVRRLNTL HEVCRLEAV
|
|---|
| |