| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00714 |
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| Symbol | RSp0337 |
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| ID | 1222469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 443566 |
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| End bp | 444621 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637240197 |
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| Product | porin precursor transmembrane protein |
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| Protein accession | NP_521898 |
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| Protein GI | 17548558 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000654265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTGA CGCAACGTTT CAAGCTGGCC GCCGTGGCGG CGGCCGGTCT CGTCAGCGCG
GCCCATGCCC AATCGTCCGT GACGCTCTAC GGCCAGGTCG ATGCCTGGGT CGGCGTGCAG
AAGGGTCTCG ACTCCAGCCG CGCCGGCGTG GTCAACCCCG GCGGCATGTC CACCTCCTAC
TGGGGCCTCA AGGGCAGCGA AGACCTCGGC AACGGCCTCA AGGGCATCTT CGCGCTCGAA
GCGTTCTTCC GCCCCGACAC CGGCCGCGCC GGCCGCTTCG ACGGCGACAA TTTCTTCGCC
CGCAATGCCT ATGTCGGCCT GGCCTCGAAC ACCTGGGGCT CCATCAAGCT CGGCCGCAAC
ACCCCGCCTT ACTTCGTCTC CACCATCCTC TTCAACCCCT TCGTCGACTC CTACACCTTC
TCGCCCGCGG TGTTCCACAC CTACATCGGC AACGGCCTGT CGGGCGCGGC CGGCATCTCC
GGCCTGGTGG GCGATTCGGG CTGGAACAAC TCGATCCTGT ATTCCACCCC CGACTTCAAC
GGCCTGAGCG CCAACCTGAT CTACGGCGCC GGCGAGCAGG CCGGCCACAA CGGCCAGAAC
AAGTGGGGCG GCAGCCTGCT GTACTTCCAC GGCAACTTCG CGGCCACGGC CGCCTACCAG
CAGGTGCGCT TCGACGCCAG CCCCGGCGAC CTGAGCACCA TCGTGGCGGG CTTCACGCGC
CAGGACGCGG CCCTGCTGGG GGCGACCTAC GACTTCGGCG CGGTCAAGCT GTACGGCCAG
TACCAGCACA TCAAGAACAC CATCTCGACG GGCGACACGA AGGCCAACGG CGGCCAGCTG
GGCGTGTCGG TGCCGCTGGG CGCGGGCAGC ATCCTGGCGT CGTACGCGTA CACCAAGACC
TCGGGCGCGG CCGACGTCAA GCGCAACACC TGGGCGATCG GCTACGACTA CGCGCTGTCC
AAGCGCACCG ACCTGTATGC GGCCTACTTC CGCGACAAGG TCACTTCGCT ATCGACCGCC
GACACCCTGG GCGTGGGCAT GCGGGCCAAG TTCTAA
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| Protein sequence | MQLTQRFKLA AVAAAGLVSA AHAQSSVTLY GQVDAWVGVQ KGLDSSRAGV VNPGGMSTSY
WGLKGSEDLG NGLKGIFALE AFFRPDTGRA GRFDGDNFFA RNAYVGLASN TWGSIKLGRN
TPPYFVSTIL FNPFVDSYTF SPAVFHTYIG NGLSGAAGIS GLVGDSGWNN SILYSTPDFN
GLSANLIYGA GEQAGHNGQN KWGGSLLYFH GNFAATAAYQ QVRFDASPGD LSTIVAGFTR
QDAALLGATY DFGAVKLYGQ YQHIKNTIST GDTKANGGQL GVSVPLGAGS ILASYAYTKT
SGAADVKRNT WAIGYDYALS KRTDLYAAYF RDKVTSLSTA DTLGVGMRAK F
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