| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4401 |
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| Symbol | |
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| ID | 4024926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4869694 |
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| End bp | 4871373 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964610 |
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| Product | OmpA-like transmembrane region |
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| Protein accession | YP_571518 |
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| Protein GI | 91978859 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAAA TCATTTTTGC TGCGGCCGCT GTGACCCTGG CCGCTGGAAC CGCCGCCGCC
GCCGATCTGC CGCGATTGCC CCCGGCTGCG CCGGTGTTGT GGAACTGGAC CGGCCTGTAT
TGGGGCGCCC ATCTCGGCGG CAGCTTCGGC GCGTCGAGCT TCAGCGATCC GGCCGGCCCC
GGCATCTATG GCGGCAACGT CCGTAGCCCG GCGGCGATGG CCGGCATTCA GCTCGGCTAC
AACTACCAGC CGAATGCGAA CTGGCTGGTC GGCGTCGAGG CCGACCTCAG CGCGCTGAAC
GGCAACGGCA CCAATAGCTG CATGGTCTCG TCCGGCCTCG TCATCTCGGC GAACTGCCGC
GTCCGCCAGG ATGCGATGGC GACCGTGACC GGCCGCGCCG GCCTTGTCAC CGGCCCCGGA
GGCCGCACGC TGCTTTACGC CAAAGGCGGC GCGGCCTTCC TCAGCGAACG AATAGATATC
ACCGTCGGAA ATCCGCTCCG CTCCTCGACC GACAATAGCG ACGGCCGCTG GGGATGGACC
GCGGGCGCCG GCATCGAGCA GGCGCTGGCG CCGGCCTGGT CGGTCAAGTT CGAATATGAC
TACGCCAATT TCGGCAGCAG CGATGTGGCG ACGCCTGCGA GCTATCGGCT GGTTCCATGG
GTCGGCTATT TCCCGACGCC GCAGGGAACC AGCAAGGTGA GTCAGGATTT GCACGCGGTG
AAAGTCGGGC TCAACCTCAA ATTCGGCGGC GATGTCGACG CGCGCTTCGA CGACTATCAT
CTGCGCGGAA GCCAGGCCGC GAACGAGATC GTCGAGCGCG GCGCAGTCGA GGTCGGCGGC
CGGGTCTGGT ACAGCTCCGG CCGTTTCCAG AAAGACCTCG GCAACACCGT CGATCAGGGT
AGCCAGAATC ATCTGATTTC GCGGCTGACC TATCAGAGCA CGGCGGCGTC GGGCGAGGCG
TTCGGCCGCG TCGATGGTCC CTACGACATG TTCCTCAAGG GCTTCGCCGG CGGCGGAACG
CTGCTGAGCG GACGCATGAA CGACGAGGAC TGGATTGCCA ATAGAGGCAT CCCGTATTCC
AACACGCTCC ACGATCCGGT CAAGGGCAGC ATCGCCTATG CGACGCTCGA CCTCGGTTAC
AATCTGCTGC GCGGACCGGA TTACAAGTTC GGCGGCTTTG TCGGCTACAA TTACTATCGC
GAGAACAAAT CGGCCTATGG CTGTGCCCAG ACGGCCGGCC CGACGGGGCA GGTCTGTGCC
GATCCGGTTC CCAACACCGT TCTCGCGATG ACGCAAAACA ATACCTGGCA TTCGCTCCGG
GTCGGCTTCA ACGGCGAAAT CGGACTCGGC CGCGGGTTGA AGCTCTCCGC CGACGCCGCC
TATCTGCCTT ATGTGAAGAC CTTCGGTGTC GATAATCACG TGATGCGTAC CGATGTCACC
GATACTGTAT CGCCGGAACA GGGAACCGGG CAGGGCGTGC AGCTCGAAGC GATCCTGTCG
TACCAGTTCA ACAATGCCTT CAGCGTCGGT GCCGGCGCAC GCTATTGGGC GATGTGGGCA
ACCACCAATG CCTACACCAA CATCTTCGGC TCGGAGTGTC CGTGCCAGAC CTTGCCGGAG
CGCACCGAGC GCTATGGAAC CTTCCTGCAG GCCGCCTACA AGTTCGACAC GCTGAACTAG
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| Protein sequence | MRQIIFAAAA VTLAAGTAAA ADLPRLPPAA PVLWNWTGLY WGAHLGGSFG ASSFSDPAGP
GIYGGNVRSP AAMAGIQLGY NYQPNANWLV GVEADLSALN GNGTNSCMVS SGLVISANCR
VRQDAMATVT GRAGLVTGPG GRTLLYAKGG AAFLSERIDI TVGNPLRSST DNSDGRWGWT
AGAGIEQALA PAWSVKFEYD YANFGSSDVA TPASYRLVPW VGYFPTPQGT SKVSQDLHAV
KVGLNLKFGG DVDARFDDYH LRGSQAANEI VERGAVEVGG RVWYSSGRFQ KDLGNTVDQG
SQNHLISRLT YQSTAASGEA FGRVDGPYDM FLKGFAGGGT LLSGRMNDED WIANRGIPYS
NTLHDPVKGS IAYATLDLGY NLLRGPDYKF GGFVGYNYYR ENKSAYGCAQ TAGPTGQVCA
DPVPNTVLAM TQNNTWHSLR VGFNGEIGLG RGLKLSADAA YLPYVKTFGV DNHVMRTDVT
DTVSPEQGTG QGVQLEAILS YQFNNAFSVG AGARYWAMWA TTNAYTNIFG SECPCQTLPE
RTERYGTFLQ AAYKFDTLN
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