| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4396 |
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| Symbol | |
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| ID | 4024921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4863385 |
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| End bp | 4864152 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964605 |
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| Product | ABC transporter related |
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| Protein accession | YP_571513 |
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| Protein GI | 91978854 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.758539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCCGAC GCCGCGCAGC CCGCGCAATG TGGCCGCGGC ACGCAGCAAC ACGATCCCGC
GCGGCCTCTG CGAGTTCACG CCATGACGCG CCGCGCCCTT CGGATCATCG TCTGATGCTG
ACCGTTTCGG GTCTGACCAA ATCCTATCGC TCGGGACAGG ACAGCGTCGC CGTACTGCGC
GGCGTCGACC TCGCGCTCGC CGCCGGCGAA AGCGTCGCGC TGACCGGCGA ATCCGGCAGC
GGCAAAAGCA CGCTGCTGCA TCTGATCGCC GGCCTCGATC AGCCCGACCA GGGCGAGATC
AACTATGGCG ACGTGACGAT TTCGCGCCTC ACCGACGCCG AGCGCGCCGC ATTCCGGCGC
GAACGTCTCG GCCTGGTGTT CCAGCAGTTC AACCTGATCC CGAGCCTCAC CGTCGCCGAC
AATCTCGCCT TCCAGTCGCG GCTCGCCGGC CGCCATGACG CCGCGTGGCA TAGCGAACTG
ATCGAGCGGC TGGGCCTCGG CCGTCTGCTG AAGCGCTATC CGGAGCAACT TTCCGGCGGC
CAGCAGCAGC GCGTCGCGAT CGGCCGCGCG CTCGCGGTCA AGCCGACGCT GCTGCTCGCC
GACGAACCGA CCGGCAATCT CGACGAGGCC ACCGCCGACG ACGTGCTGGC GCTGGCCAAC
GATCTGGTCC GCCGCACCGG CTGCGGCTTC CTGATGGTGA CGCACAGCGA ACGCCTCGCC
GCGACGCTCG ACCGACGTGT CAACCTTCAT GCGGGGCTGA TCCATTGA
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| Protein sequence | MVRRRAARAM WPRHAATRSR AASASSRHDA PRPSDHRLML TVSGLTKSYR SGQDSVAVLR
GVDLALAAGE SVALTGESGS GKSTLLHLIA GLDQPDQGEI NYGDVTISRL TDAERAAFRR
ERLGLVFQQF NLIPSLTVAD NLAFQSRLAG RHDAAWHSEL IERLGLGRLL KRYPEQLSGG
QQQRVAIGRA LAVKPTLLLA DEPTGNLDEA TADDVLALAN DLVRRTGCGF LMVTHSERLA
ATLDRRVNLH AGLIH
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